RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ACANP16112 2415 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 NIPBLQ6KC79 2804 aaeCLIP11.07□□□□□ -0.643e-6■■□□□ 13.1
VEGFA-223ENST00000523125 RNF103-CHMP3A0A140T963 221 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 TMEM120BA0PK00 339 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 DUXAA6NLW8 204 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 DEFB108AA8MXU0 73 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 DNAJA2O60884 412 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SS18L1O75177 396 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SNNO75324 88 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 POU2F1P14859 743 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 PRKCAP17252 672 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 LBPP18428 481 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 DNASE1P24855 282 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 ELK4P28324 431 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 ADH6P28332 368 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SFTPDP35247 375 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 EIF1P41567 113 aaKnown RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 CASP9P55211 416 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SUMO3P55854 103 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 FGFBP1Q14512 234 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF141Q15928 474 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 ARHGAP11BQ3KRB8 267 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SLC25A53Q5H9E4 307 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SPANXN4Q5MJ08 99 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 PDZK1Q5T2W1 519 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 FBXW10Q5XX13 1052 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 HBMQ6B0K9 141 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 HEPHL1Q6MZM0 1159 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 KIRREL3Q8IZU9 778 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 ANKRD42Q8N9B4 389 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 OR4A15Q8NGL6 344 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 OR6K3Q8NGY3 331 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 FBXO27Q8NI29 283 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 OSTF1Q92882 214 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 GMPPAQ96IJ6 420 aaPredicted RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SLC35G5Q96KT7 338 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 MARK4Q96L34 752 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 KLHL15Q96M94 604 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 PAIP2Q9BPZ3 127 aaKnown RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 SLC39A3Q9BRY0 314 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 PRRG4Q9BZD6 226 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 OR51I1Q9H343 314 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 MCTS1Q9ULC4 181 aaKnown RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 PROCRQ9UNN8 238 aa11.07□□□□□ -0.64
VEGFA-223ENST00000523125 FLNAP21333 2647 aaKnown RBP11.07□□□□□ -0.64
VEGFA-223ENST00000523125 MTORP42345 2549 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 SERINC4A6NH21 518 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 C16orf97H3BN30 126 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 H3BNH8 94 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 GTPBP1O00178 669 aaKnown RBP11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ETV2O00321 342 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF195O14628 629 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 CASKO14936 926 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF264O43296 627 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 STX11O75558 287 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 UGT2B17O75795 530 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 CPSF4O95639 269 aaKnown RBP11.06□□□□□ -0.64
VEGFA-223ENST00000523125 NUDT14O95848 222 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 RAF1P04049 648 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 UBL4AP11441 157 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 UQCRC2P22695 453 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ME2P23368 584 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 IL12AP29459 219 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 CARD18P57730 90 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 UFM1P61960 85 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 FUT5Q11128 374 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 SKP2Q13309 424 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 GPR68Q15743 365 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 MAPK14Q16539 360 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 FAM174BQ3ZCQ3 159 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ANXA8L1Q5VT79 327 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 HHATQ5VTY9 493 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 SAXO2Q658L1 398 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 PPP4R4Q6NUP7 873 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF550Q7Z398 422 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF614Q8N883 585 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 OR5W2Q8NH69 310 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ROBO4Q8WZ75 1007 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 RAB8BQ92930 207 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ARSGQ96EG1 525 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ALPK1Q96QP1 1244 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 SRXN1Q9BYN0 137 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 ZNF350Q9GZX5 532 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 AIG1Q9NVV5 245 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 C6orf203Q9P0P8 240 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-223ENST00000523125 MKLN1Q9UL63 735 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 PCDHGB4Q9UN71 923 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 EDARQ9UNE0 448 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 EMC9Q9Y3B6 208 aa11.06□□□□□ -0.64
VEGFA-223ENST00000523125 GPC6Q9Y625 555 aaPredicted RBP11.06□□□□□ -0.64
VEGFA-223ENST00000523125 C2CD3Q4AC94 2353 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 PRAMEF27A3QJZ7 478 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 E9PBE3 544 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 EIF4E2O60573 245 aaKnown RBP11.05□□□□□ -0.64
VEGFA-223ENST00000523125 SYNGR4O95473 234 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 AK1P00568 194 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 PLGP00747 810 aaPredicted RBP11.05□□□□□ -0.64
VEGFA-223ENST00000523125 GUSBP08236 651 aa11.05□□□□□ -0.64
VEGFA-223ENST00000523125 OR12D1P0DN82 309 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms