RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TANKQ92844 425 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 SNX18Q96RF0 628 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 WDR77Q9BQA1 342 aaPredicted RBP12.95□□□□□ -0.34
SYNPO-205ENST00000522122 MRI1Q9BV20 369 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 TEX10Q9NXF1 929 aaPredicted RBP12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NDUFAF4Q9P032 175 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 KCNN3Q9UGI6 736 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 DKKL1Q9UK85 242 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 RASD1Q9Y272 281 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 SCN1AP35498 2009 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NPIPA5A0A0B4J1W7 369 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NPIPA7E9PJI5 369 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 FARS2O95363 451 aaKnown RBP12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NPIPA8P0DM63 369 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 TGM1P22735 817 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 PRPH2P23942 346 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 DDOSTP39656 456 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 DEFB103AP81534 67 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 SERTAD2Q14140 314 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NSDHLQ15738 373 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 ENTPD8Q5MY95 495 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF761Q86XN6 746 aaPredicted RBP12.95□□□□□ -0.34
SYNPO-205ENST00000522122 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 OR4F15Q8NGB8 312 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 KLHL15Q96M94 604 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 CTRCQ99895 268 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 OR51J1Q9H342 316 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 ACTR10Q9NZ32 417 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 VSTM2BA6NLU5 285 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 CCNOP22674 350 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 RPL19P84098 196 aaKnown RBP12.95□□□□□ -0.34
SYNPO-205ENST00000522122 TSPAN31Q12999 210 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 GPR19Q15760 415 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 VRK2Q86Y07 508 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 GALNT11Q8NCW6 608 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 ASB12Q8WXK4 309 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 COQ10AQ96MF6 247 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 CSF3RQ99062 836 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 SYNPO2LQ9H987 977 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 PIPP12273 146 aaPredicted RBP12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NLRP8Q86W28 1048 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 LRRC56Q8IYG6 542 aaPredicted RBP12.95□□□□□ -0.34
SYNPO-205ENST00000522122 GPR148Q8TDV2 347 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 PGAM5Q96HS1 289 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 LMF1Q96S06 567 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NIPSNAP1Q9BPW8 284 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 NT5DC2Q9H857 520 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 SIAEQ9HAT2 523 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 TAS2R16Q9NYV7 291 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 ADAM29Q9UKF5 820 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
SYNPO-205ENST00000522122 BORCS7-ASMTA0A0B4J1R7 106 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 SEMA4FO95754 770 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 FURINP09958 794 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 AMY2BP19961 511 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 PCMT1P22061 227 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 HSD11B2P80365 405 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 CCINQ13939 588 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 PYCR3Q53H96 274 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 DCST2Q5T1A1 773 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 USP53Q70EK8 1073 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 WDR53Q7Z5U6 358 aaPredicted RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 GON7Q9BXV9 100 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 TMEM38AQ9H6F2 299 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 MN1Q10571 1320 aaPredicted RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 LOC102723532A0A0G2JNH3 316 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 DUX1O43812 170 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 PRAF2O60831 178 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 CSO75390 466 aaKnown RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 CD3GP09693 182 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 PNMTP11086 282 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 CEBPBP17676 345 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 GALK2Q01415 458 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 ILKQ13418 452 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 PCGF3Q3KNV8 242 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 MEPCEQ7L2J0 689 aaKnown RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 LRRC28Q86X40 367 aaPredicted RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF683Q8IZ20 524 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF417Q8TAU3 575 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 UBE2FQ969M7 185 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 OR5M11Q96RB7 305 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 NPIPA2E9PIF3 369 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 NPIPA3F8WFD2 350 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 RFPL3O75679 317 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 WISP3O95389 354 aaPredicted RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 FBXO45P0C2W1 286 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 THEGLP0DJG4 465 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 ZNF84P51523 738 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 ZC3H14Q6PJT7 736 aaKnown RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 ELMOD3Q96FG2 381 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 CXXC1Q9P0U4 656 aaPredicted RBP12.94□□□□□ -0.34
SYNPO-205ENST00000522122 SC5DO75845 299 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 TIMP1P01033 207 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 TFP02787 698 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 S100A2P29034 98 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 PLGLB1Q02325 96 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 TATDN3Q17R31 274 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 C1orf189Q5VU69 101 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 VRK3Q8IV63 474 aa12.94□□□□□ -0.34
SYNPO-205ENST00000522122 LAX1Q8IWV1 398 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms