RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	MRPL19	P49406	292 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ARFIP2	P53365	341 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	RPS3A	P61247	264 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SIRPA	P78324	504 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FOXF2	Q12947	444 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SKP2	Q13309	424 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SNTB1	Q13884	538 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CBFB	Q13951	182 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FGFBP1	Q14512	234 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PON3	Q15166	354 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	QPRT	Q15274	297 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZNF141	Q15928	474 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CGB2	Q6NT52	195 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	BLOC1S3	Q6QNY0	202 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MEX3B	Q6ZN04	569 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	EIF3M	Q7L2H7	374 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LILRB4	Q8NHJ6	448 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FBXO27	Q8NI29	283 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZNF563	Q8TA94	476 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	POC1B	Q8TC44	478 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZPLD1	Q8TCW7	415 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	WDR60	Q8WVS4	1066 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FIG4	Q92562	907 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZBTB8A	Q96BR9	441 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	INTS12	Q96CB8	462 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZG16B	Q96DA0	208 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	DNAJA3	Q96EY1	480 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TMEM19	Q96HH6	336 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	THUMPD3	Q9BV44	507 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PRRG4	Q9BZD6	226 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SLC38A1	Q9H2H9	487 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CACYBP	Q9HB71	228 aa	Known RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	HHATL	Q9HCP6	504 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SLC25A37	Q9NYZ2	338 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SLAMF8	Q9P0V8	285 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CLCF1	Q9UBD9	225 aa		7.54	□□□□□ -1.2
CTNNA1-231	ENST00000521941	INTS1	Q8N201	2190 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ANGPT2	O15123	496 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	HNRNPR	O43390	633 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CXCL13	O43927	109 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	EIF4E2	O60573	245 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LINGO3	P0C6S8	592 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZCCHC18	P0CG32	403 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	IL7R	P16871	459 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PRKCA	P17252	672 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CTSS	P25774	331 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SHC1	P29353	583 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	UQCRC1	P31930	480 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CEACAM8	P31997	349 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TIMP3	P35625	211 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MDH1	P40925	334 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CPA2	P48052	419 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MVD	P53602	400 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CRISP3	P54108	245 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SUMO3	P55854	103 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CLDN15	P56746	228 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	EEFSEC	P57772	596 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	NFYC	Q13952	458 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	RGN	Q15493	299 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TMEM44	Q2T9K0	475 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SLC25A35	Q3KQZ1	300 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GLYR1	Q49A26	553 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MRPL2	Q5T653	305 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LRRC74B	Q6ZQY2	392 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	DHDDS	Q86SQ9	333 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LUZP2	Q86TE4	346 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GGN	Q86UU5	652 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	VRK2	Q86Y07	508 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MSRB3	Q8IXL7	192 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PEX5L	Q8IYB4	626 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CNEP1R1	Q8N9A8	125 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	OR5W2	Q8NH69	310 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	OR10D3	Q8NH80	312 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FNDC9	Q8TBE3	224 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GPR119	Q8TDV5	335 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CNOT9	Q92600	299 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MAL2	Q969L2	176 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZNF524	Q96C55	264 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	KLHL15	Q96M94	604 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TRNT1	Q96Q11	434 aa	Known RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TM9SF2	Q99805	663 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SIKE1	Q9BRV8	207 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TRIM8	Q9BZR9	551 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LAT2	Q9GZY6	243 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FAM107B	Q9H098	131 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	RAD21L1	Q9H4I0	556 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	RABEP2	Q9H5N1	569 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZNF385D	Q9H6B1	395 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CALHM2	Q9HA72	323 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	NPDC1	Q9NQX5	325 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	POLE3	Q9NRF9	147 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	VAPA	Q9P0L0	249 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	STOML1	Q9UBI4	398 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LEF1	Q9UJU2	399 aa	Predicted RBP	7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ICAM5	Q9UMF0	924 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CLEC4A	Q9UMR7	237 aa		7.53	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LIPT1	Q9Y234	373 aa		7.53	□□□□□ -1.2

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