RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 KLC3Q6P597 504 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PAPD4Q6PIY7 484 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 AGTRAPQ6RW13 159 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SBSNQ6UWP8 590 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ARHGAP22Q7Z5H3 698 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 GALNT5Q7Z7M9 940 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CCDC190Q86UF4 302 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OOSP2Q86WS3 158 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 KLHDC8AQ8IYD2 350 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CENPLQ8N0S6 344 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TCAIMQ8N3R3 496 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 C2orf73Q8N5S3 287 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 STPG4Q8N801 248 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 LINC01555Q8NAE3 123 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OR4D9Q8NGE8 314 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OR8K5Q8NH50 307 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 FLVCR1-AS1Q8TAF5 88 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 RHEBL1Q8TAI7 183 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ATL1Q8WXF7 558 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SMPDL3AQ92484 453 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PHF21AQ96BD5 680 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ZNF524Q96C55 264 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 RHBDF1Q96CC6 855 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ERP27Q96DN0 273 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SAT2Q96F10 170 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PGM2Q96G03 612 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PKNOX2Q96KN3 472 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TSNARE1Q96NA8 513 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ZIM3Q96PE6 472 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OR2A14Q96R47 310 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ATOH8Q96SQ7 321 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 NRTNQ99748 197 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 MRPL57Q9BQC6 102 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CENPOQ9BU64 300 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PCBD2Q9H0N5 130 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 STMN4Q9H169 189 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 ALG9Q9H6U8 611 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 VIPAS39Q9H9C1 493 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TMBIM4Q9HC24 238 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SPHK1Q9NYA1 384 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CD274Q9NZQ7 290 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TMEM216Q9P0N5 145 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SENP1Q9P0U3 644 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 STOX2Q9P2F5 926 aaPredicted RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TBK1Q9UHD2 729 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 CIDEBQ9UHD4 219 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PTBP2Q9UKA9 531 aaKnown RBP2.92□□□□□ -1.94
VPS13B-209ENST00000521559 POMT2Q9UKY4 750 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 GRID1Q9ULK0 1009 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 TMCO1Q9UM00 188 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PLAGL1Q9UM63 463 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 OARD1Q9Y530 152 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 SNX8Q9Y5X2 465 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 NUMA1Q14980 2115 aa2.92□□□□□ -1.94
VPS13B-209ENST00000521559 PCDH15Q96QU1 1955 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 C5orf42Q9H799 3197 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 GSAPA4D1B5 854 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 KRT87PA6NCN2 255 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 TLCD2A6NGC4 264 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 GOLGA6L10A6NI86 522 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SLC9B1P1A6NJY1 282 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 A8MZ25 164 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SUPT3HB4E1H0 165 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 D6RAR5 112 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 FAM90A26D6RGX4 464 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 UBXN8O00124 270 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 COPEO14579 308 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CASC3O15234 703 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 OGG1O15527 345 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ATP8B1O43520 1251 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PLIN3O60664 434 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CTSVO60911 334 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SMIM24O75264 130 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CSO75390 466 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SUPT3HO75486 399 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 STK16O75716 305 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 GUCA1CO95843 209 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ANKRD34CP0C6C1 535 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 THRAP10827 490 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CPA3P15088 417 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PVRP15151 417 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 UGT2B7P16662 529 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 GABRB1P18505 474 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 ANXA7P20073 488 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 TAC1P20366 129 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CDH3P22223 829 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 HRH2P25021 359 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 IMPA1P29218 277 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CMPK1P30085 196 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PEBP1P30086 187 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 RPA3P35244 121 aaPredicted RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 KRT20P35900 424 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 APOBEC1P41238 236 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CAPZBP47756 277 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 SLC6A12P48065 614 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 CAMPP49913 170 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 GFERP55789 205 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PPP1CAP62136 330 aa2.91□□□□□ -1.94
VPS13B-209ENST00000521559 PRDX1Q06830 199 aaKnown RBP2.91□□□□□ -1.94
VPS13B-209ENST00000521559 FCN2Q15485 313 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms