RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 SLC5A11Q8WWX8 675 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 RPL3LQ92901 407 aaKnown RBP3.49□□□□□ -1.85
PTPN12-214ENST00000520947 FAF2Q96CS3 445 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 SLC25A38Q96DW6 304 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 KIR2DL4Q99706 377 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 ERP44Q9BS26 406 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 DUSP16Q9BY84 665 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 PPDPFQ9H3Y8 114 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 VNN3Q9NY84 501 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 COX16Q9P0S2 106 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 GNG12Q9UBI6 72 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 RIMS3Q9UJD0 308 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 CLEC4EQ9ULY5 219 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 OARD1Q9Y530 152 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 FLVCR1Q9Y5Y0 555 aa3.49□□□□□ -1.85
PTPN12-214ENST00000520947 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 HAT1O14929 419 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 CABYRO75952 493 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 CA1P00915 261 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 P0C879 139 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 UQCRC2P22695 453 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 PSMA5P28066 241 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 SELPLGQ14242 412 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 KIAA0040Q15053 153 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 PRR4Q16378 134 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 NDUFA9Q16795 377 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 KRTAP13-3Q3SY46 172 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 GGTA1PQ4G0N0 100 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 PAGE2BQ5JRK9 111 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 SPATA46Q5T0L3 261 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 ZNF658Q5TYW1 1059 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 FAHD2BQ6P2I3 314 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 CASC1Q6TDU7 716 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 CXCL17Q6UXB2 119 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 CADM2Q8N3J6 435 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 AENQ8WTP8 325 aaKnown RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 FAHD2AQ96GK7 314 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 ZIM3Q96PE6 472 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 OR5B2Q96R09 309 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 SLC6A7Q99884 636 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 CITED1Q99966 193 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 C19orf24Q9BVV8 132 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 TMEM117Q9H0C3 514 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 DCAF16Q9NXF7 216 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 WRAP73Q9P2S5 460 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 APOBEC3BQ9UH17 382 aaKnown RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 KLHL21Q9UJP4 597 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 HPCAL4Q9UM19 191 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 ZNF256Q9Y2P7 627 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 MRPS7Q9Y2R9 242 aaKnown RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 OR10H1Q9Y4A9 318 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 KIF25-AS1Q9Y6Z4 181 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 ZNF646O15015 1829 aaPredicted RBP3.48□□□□□ -1.85
PTPN12-214ENST00000520947 KDRP35968 1356 aa3.48□□□□□ -1.85
PTPN12-214ENST00000520947 LOC100131303A0A0U1RQF7 123 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 OR7A17O14581 309 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 GMFGO60234 142 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 TBX19O60806 448 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 BCAS1O75363 584 aaPredicted RBP3.47□□□□□ -1.85
PTPN12-214ENST00000520947 SPAG6O75602 509 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 CCDC166P0CW27 439 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 RPA2P15927 270 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 PGCP20142 388 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 SERPINA2P20848 420 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 OTX2P32243 289 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 RGS4P49798 205 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 GBX2P52951 348 aaPredicted RBP3.47□□□□□ -1.85
PTPN12-214ENST00000520947 LYZP61626 148 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 RIPPLY1Q0D2K3 151 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 RAB40BQ12829 278 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 PDK4Q16654 411 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 TPD52L1Q16890 204 aaPredicted RBP3.47□□□□□ -1.85
PTPN12-214ENST00000520947 ATAD3BQ5T9A4 648 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 UBQLNLQ8IYU4 475 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 FAM3CQ92520 227 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 HAVCR1Q96D42 359 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 C12orf66Q96MD2 445 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 CYP2S1Q96SQ9 504 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 ALG12Q9BV10 488 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 CRNKL1Q9BZJ0 848 aaKnown RBP3.47□□□□□ -1.85
PTPN12-214ENST00000520947 POLR1EQ9GZS1 481 aaKnown RBP3.47□□□□□ -1.85
PTPN12-214ENST00000520947 RMND5AQ9H871 391 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 ELOVL3Q9HB03 270 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 SNX6Q9UNH7 406 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 CA5BQ9Y2D0 317 aa3.47□□□□□ -1.85
PTPN12-214ENST00000520947 PRRC2AP48634 2157 aaKnown RBP3.46□□□□□ -1.85
PTPN12-214ENST00000520947 FRMPD4Q14CM0 1322 aa3.46□□□□□ -1.85
PTPN12-214ENST00000520947 DHRS7CA6NNS2 312 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 MAGEB3O15480 346 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 RHOBTB1O94844 696 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 SNX4O95219 450 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 IQCF3P0C7M6 154 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 ZP3P21754 424 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 UGT1A3P35503 534 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 CHI3L1P36222 383 aaPredicted RBP3.46□□□□□ -1.86
PTPN12-214ENST00000520947 HPCAL1P37235 193 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 ACTR1AP61163 376 aa3.46□□□□□ -1.86
PTPN12-214ENST00000520947 OTUD4Q01804 1114 aaKnown RBP3.46□□□□□ -1.86
PTPN12-214ENST00000520947 CUL1Q13616 776 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms