RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SIGLEC7Q9Y286 467 aa23.78■■□□□ 1.4
COL13A1-213ENST00000520267 A0A0B4J2E0 115 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 IQCMA0A1B0GVH7 501 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 A0A1B0GWA3 101 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 A0A1B0GX12 115 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 A0A1W2PR77 199 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 NME1P15531 152 aaKnown RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 ACAA2P42765 397 aaKnown RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 HNRNPA0Q13151 305 aaKnown RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 ZNF267Q14586 743 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 METTL27Q8N6F8 245 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 PSD4Q8NDX1 1056 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 OR51G2Q8NGK0 314 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 SPRYD4Q8WW59 207 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 J3QRE1 110 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 SAGP10523 405 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 BMP8BP34820 402 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 GABRA4P48169 554 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 IGLV3-21P80748 117 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 NIPAL3Q6P499 406 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 BMP8AQ7Z5Y6 402 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 ZNF595Q8IYB9 648 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 SLC38A3Q99624 504 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 TTYH1Q9H313 450 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 C14orf119Q9NWQ9 140 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 PLEKHB1Q9UF11 243 aaPredicted RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 MRPS33Q9Y291 106 aaKnown RBP23.77■■□□□ 1.4
COL13A1-213ENST00000520267 TMEM5Q9Y2B1 443 aa23.77■■□□□ 1.4
COL13A1-213ENST00000520267 TRAV27A0A087WT01 109 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-213ENST00000520267 SMIM30A4D0T7 59 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 CHP2O43745 196 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 RCBTB2O95199 551 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 DLGAP3O95886 979 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 MAOAP21397 527 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 CD38P28907 300 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 CTBP2P56545 445 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 FAM53BQ14153 422 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 GRAMD2AQ8IUY3 354 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 GID4Q8IVV7 300 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 RCBTB1Q8NDN9 531 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 DGAT2Q96PD7 388 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 IFT27Q9BW83 186 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 PHF7Q9BWX1 381 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-213ENST00000520267 FN3KQ9H479 309 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 V9GYH0 126 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 NSA2O95478 260 aaKnown RBP23.76■■□□□ 1.39
COL13A1-213ENST00000520267 CD27P26842 260 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 GFERP55789 205 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 FZD5Q13467 585 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 SMAD4Q13485 552 aaKnown RBP23.76■■□□□ 1.39
COL13A1-213ENST00000520267 TDGQ13569 410 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 CD200R1LQ6Q8B3 271 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 MEPCEQ7L2J0 689 aaKnown RBP23.76■■□□□ 1.39
COL13A1-213ENST00000520267 GKN2Q86XP6 184 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 OR51A7Q8NH64 312 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 DCLRE1CQ96SD1 692 aaKnown RBP23.76■■□□□ 1.39
COL13A1-213ENST00000520267 CMAHPQ9Y471 501 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 TMEM184BQ9Y519 407 aaPredicted RBP23.76■■□□□ 1.39
COL13A1-213ENST00000520267 PCDH15Q96QU1 1955 aa23.76■■□□□ 1.39
COL13A1-213ENST00000520267 METTL12A8MUP2 240 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 SOX30O94993 753 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 PTTG1O95997 202 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 NGFRP08138 427 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 PPM1FP49593 454 aaPredicted RBP23.75■■□□□ 1.39
COL13A1-213ENST00000520267 FOXK2Q01167 660 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 NNATQ16517 81 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 TMPRSS11AQ6ZMR5 421 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 OR52N1Q8NH53 320 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 MMABQ96EY8 250 aaPredicted RBP23.75■■□□□ 1.39
COL13A1-213ENST00000520267 ABHD8Q96I13 439 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 WDFY2Q96P53 400 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 MED18Q9BUE0 208 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 CCDC32Q9BV29 185 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 JAM3Q9BX67 310 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 TRAPPC4Q9Y296 219 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 PTP4A3O75365 173 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 ATXN8OSP0DMR3 200 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 SLC9A3P48764 834 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 ZMAT1Q5H9K5 638 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 FCRLBQ6BAA4 426 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 RPL13AP3Q6NVV1 102 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 OR6C4Q8NGE1 309 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 ZNF285Q96NJ3 590 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 TGM7Q96PF1 710 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 EVA1AQ9H8M9 152 aa23.75■■□□□ 1.39
COL13A1-213ENST00000520267 LILRA5A6NI73 299 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 GUSBP08236 651 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 FGF9P31371 208 aaPredicted RBP23.74■■□□□ 1.39
COL13A1-213ENST00000520267 MLLT3P42568 568 aaPredicted RBP23.74■■□□□ 1.39
COL13A1-213ENST00000520267 GPR3P46089 330 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 PGDP52209 483 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 SKP1P63208 163 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 ACSM1Q08AH1 577 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 ZNF322Q6U7Q0 402 aaPredicted RBP23.74■■□□□ 1.39
COL13A1-213ENST00000520267 PTP4A1Q93096 173 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 KATNB1Q9BVA0 655 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 TMED9Q9BVK6 235 aa23.74■■□□□ 1.39
COL13A1-213ENST00000520267 ISG20L2Q9H9L3 353 aaKnown RBP23.74■■□□□ 1.39
COL13A1-213ENST00000520267 TBC1D17Q9HA65 648 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms