RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SCN3BQ9NY72 215 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 PRODH2Q9UF12 536 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 CBLCQ9ULV8 474 aa13.33□□□□□ -0.28
CLN8-204ENST00000519254 LOC101059948A0A1B0GTJ6 334 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 CCDC160A6NGH7 325 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 FAM20BO75063 409 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 CYC1P08574 325 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 F8A1P23610 371 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 GSTT1P30711 240 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 IFNA8P32881 189 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 CDC42P60953 191 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 CSNK2BP67870 215 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 TEKQ02763 1124 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 ZNF141Q15928 474 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 SLX4IPQ5VYV7 408 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 GTF2IRD2BQ6EKJ0 949 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 ZNF730Q6ZMV8 503 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 GTF2IRD2Q86UP8 949 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 RANBP3LQ86VV4 465 aaPredicted RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 MEX3DQ86XN8 651 aaKnown RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 BCORP1Q8N888 145 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 B3GNT7Q8NFL0 401 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 ACOT11Q8WXI4 607 aaPredicted RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 CNOT9Q92600 299 aaKnown RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 NMD3Q96D46 503 aaKnown RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 WDR77Q9BQA1 342 aaPredicted RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 TUBA1CQ9BQE3 449 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 PLCXD1Q9NUJ7 323 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 IMPAD1Q9NX62 359 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 PCDHGA10Q9Y5H3 936 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 HS3ST3B1Q9Y662 390 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 MRPS18BQ9Y676 258 aaKnown RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 LYPD3O95274 346 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 PAX7P23759 505 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 OMPP47874 163 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 TGIF1Q15583 401 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 C12orf73Q69YU5 71 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 KIF18BQ86Y91 864 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 GRAMD2AQ8IUY3 354 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 C9orf40Q8IXQ3 194 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 ZNF540Q8NDQ6 660 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 OR13F1Q8NGS4 319 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 GNPDA2Q8TDQ7 276 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 NKD1Q969G9 470 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 SIGLEC11Q96RL6 698 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 MYCBPQ99417 103 aaPredicted RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 PRSS27Q9BQR3 290 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 G6PC3Q9BUM1 346 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 POLR2J2Q9GZM3 115 aaKnown RBP13.32□□□□□ -0.28
CLN8-204ENST00000519254 ARMC7Q9H6L4 198 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 SLC7A7Q9UM01 511 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 OR10H1Q9Y4A9 318 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 PCDHGB1Q9Y5G3 927 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 SNX5Q9Y5X3 404 aa13.32□□□□□ -0.28
CLN8-204ENST00000519254 TRAPPC13A5PLN9 417 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 C21orf140B9A014 251 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 H3BN98 237 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 FMO6PO60774 539 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 SEC14L2O76054 403 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 CD82P27701 267 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 TTKP33981 857 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 EMX1Q04741 257 aaPredicted RBP13.31□□□□□ -0.28
CLN8-204ENST00000519254 PCOLCEQ15113 449 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 OR1Q1Q15612 314 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 HLA-DQA1Q5Y7H0 255 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 SLC29A4Q7RTT9 530 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 P3H2Q8IVL5 708 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 NFAM1Q8NET5 270 aaPredicted RBP13.31□□□□□ -0.28
CLN8-204ENST00000519254 TOR1AIP2Q8NFQ8 470 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 TMEM255BQ8WV15 326 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 ARSGQ96EG1 525 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 LMF1Q96S06 567 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 TSC22D3Q99576 134 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 GPR87Q9BY21 358 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 NRSN2Q9GZP1 204 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 CCDC90BQ9GZT6 254 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 LHPPQ9H008 270 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 VCX3AQ9NNX9 186 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 RSL24D1Q9UHA3 163 aaKnown RBP13.31□□□□□ -0.28
CLN8-204ENST00000519254 PSORS1C1Q9UIG5 152 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 KLK13Q9UKR3 277 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 CFL2Q9Y281 166 aa13.31□□□□□ -0.28
CLN8-204ENST00000519254 CFAP54Q96N23 3096 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 LOC102723996A0A087X1L8 192 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 IGHV1-45A0A0A0MS14 117 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 TRBV11-1A0A0K0K1C0 115 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 C2orf92A0A1B0GVN3 265 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 CDC14CA4D256 554 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 SOCS6O14544 535 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 ADAM11O75078 769 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 IGHEP01854 428 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 MT-ND2P03891 347 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 COX6A1P12074 109 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 SPINK2P20155 84 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 GSTM3P21266 225 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 IFNGR2P38484 337 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 PPICP45877 212 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 ATP12AP54707 1039 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 SLC26A5P58743 744 aa13.3□□□□□ -0.28
CLN8-204ENST00000519254 TSPAN31Q12999 210 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms