RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CLDN19Q8N6F1 224 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 OR10A7Q8NGE5 316 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 ANKRD49Q8WVL7 239 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 SMIM14Q96QK8 99 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 NMUR2Q9GZQ4 415 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 ZNF385DQ9H6B1 395 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 PAK1IP1Q9NWT1 392 aaPredicted RBP3.19□□□□□ -1.9
SQLE-202ENST00000518604 NPIPA1Q9UND3 350 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 ATP6V0A2Q9Y487 856 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 OR10H1Q9Y4A9 318 aa3.19□□□□□ -1.9
SQLE-202ENST00000518604 IGHV2-70DA0A0C4DH43 119 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 H3BMQ9 156 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 MSH4O15457 936 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 OR1F1O43749 312 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 ECI2O75521 394 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 GUCA1CO95843 209 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 F10P00742 488 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 HSPA5P11021 654 aaKnown RBP3.18□□□□□ -1.9
SQLE-202ENST00000518604 EPB41P11171 864 aaKnown RBP3.18□□□□□ -1.9
SQLE-202ENST00000518604 VDAC1P21796 283 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 NTSP30990 170 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 CD80P33681 288 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 HNRNPA3P51991 378 aaKnown RBP3.18□□□□□ -1.9
SQLE-202ENST00000518604 NDPQ00604 133 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 ZNF79Q15937 498 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 AANATQ16613 207 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 SLC5A12Q1EHB4 618 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 EOGTQ5NDL2 527 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 LIPNQ5VXI9 398 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 FAM71F2Q6NXP2 309 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 BLOC1S2Q6QNY1 142 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 OR9A1PQ8NGU1 263 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 LINC01006Q8NI28 216 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 ZNF564Q8TBZ8 553 aaPredicted RBP3.18□□□□□ -1.9
SQLE-202ENST00000518604 PNPT1Q8TCS8 783 aaKnown RBP3.18□□□□□ -1.9
SQLE-202ENST00000518604 NEIL2Q969S2 332 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 DTNBP1Q96EV8 351 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 C7orf34Q96L11 122 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 IL4I1Q96RQ9 567 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 MCHR1Q99705 422 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 OMDQ99983 421 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 CNPY3Q9BT09 278 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 TEX13BQ9BXU2 312 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 SRXN1Q9BYN0 137 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 SMYD3Q9H7B4 428 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 ISG20L2Q9H9L3 353 aaKnown RBP3.18□□□□□ -1.9
SQLE-202ENST00000518604 FANCFQ9NPI8 374 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 TMOD2Q9NZR1 351 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 GNG12Q9UBI6 72 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 SH3BGRL2Q9UJC5 107 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 ZNF221Q9UK13 617 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 MAD1L1Q9Y6D9 718 aa3.18□□□□□ -1.9
SQLE-202ENST00000518604 IGHV1OR15-1A0A075B7D0 117 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 A0A1B0GWB2 263 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 ZSCAN12O43309 604 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 BCAS1O75363 584 aaPredicted RBP3.17□□□□□ -1.9
SQLE-202ENST00000518604 ADCY5O95622 1261 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 LALBAP00709 142 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 TSPY4P0CV99 314 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 TSPY10P0CW01 314 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 DRD5P21918 477 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 CALB2P22676 271 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 OTX2P32243 289 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 SOX6P35712 828 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 CHI3L1P36222 383 aaPredicted RBP3.17□□□□□ -1.9
SQLE-202ENST00000518604 OR3A4PP47883 348 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 PLK1P53350 603 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 EWSR1Q01844 656 aaKnown RBP eCLIP3.17□□□□□ -1.9
SQLE-202ENST00000518604 ZNF45Q02386 682 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 SLC10A7Q0GE19 358 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 MESDQ14696 234 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 WDR74Q6RFH5 385 aaPredicted RBP3.17□□□□□ -1.9
SQLE-202ENST00000518604 SCARA5Q6ZMJ2 495 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 SKA3Q8IX90 412 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 CEND1Q8N111 149 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 LINC01561Q8N1V8 128 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 THRSPQ92748 146 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 C16orf74Q96GX8 76 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 CELF6Q96J87 481 aaKnown RBP3.17□□□□□ -1.9
SQLE-202ENST00000518604 NOL4LQ96MY1 436 aaPredicted RBP3.17□□□□□ -1.9
SQLE-202ENST00000518604 CYP2S1Q96SQ9 504 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 NICN1Q9BSH3 213 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 NAT10Q9H0A0 1025 aaKnown RBP3.17□□□□□ -1.9
SQLE-202ENST00000518604 NUDT15Q9NV35 164 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 B3GNT2Q9NY97 397 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 IL17CQ9P0M4 197 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 ABCG2Q9UNQ0 655 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 PLLPQ9Y342 182 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 MAB21L2Q9Y586 359 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 DDX49Q9Y6V7 483 aaKnown RBP3.17□□□□□ -1.9
SQLE-202ENST00000518604 KIF16BQ96L93 1317 aa3.17□□□□□ -1.9
SQLE-202ENST00000518604 ATRXP46100 2492 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 ZNF705EA8MWA4 302 aaPredicted RBP3.16□□□□□ -1.9
SQLE-202ENST00000518604 E7ESA3 106 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 SULT2B1O00204 365 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 FCN1O00602 326 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 TPST2O60704 377 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 RNH1P13489 461 aaKnown RBP3.16□□□□□ -1.9
SQLE-202ENST00000518604 CYP2B6P20813 491 aa3.16□□□□□ -1.9
SQLE-202ENST00000518604 HOXD10P28358 340 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms