RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 DMXL2Q8TDJ6 3036 aa2.55□□□□□ -2
SKP1-204ENST00000517691 IGF2RP11717 2491 aa2.55□□□□□ -2
SKP1-204ENST00000517691 TP53BP1Q12888 1972 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 DSPP15924 2871 aaKnown RBP2.55□□□□□ -2
SKP1-204ENST00000517691 A0A087WZY1 265 aa2.55□□□□□ -2
SKP1-204ENST00000517691 A0A0G2JN53 185 aa2.55□□□□□ -2
SKP1-204ENST00000517691 WDR91A4D1P6 747 aa2.55□□□□□ -2
SKP1-204ENST00000517691 LRIT2A6NDA9 550 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ZNF860A6NHJ4 632 aa2.55□□□□□ -2
SKP1-204ENST00000517691 G3V2L1 256 aa2.55□□□□□ -2
SKP1-204ENST00000517691 H3BMH7 237 aa2.55□□□□□ -2
SKP1-204ENST00000517691 K7ENP7 123 aa2.55□□□□□ -2
SKP1-204ENST00000517691 PSMD12O00232 456 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 PSMD9O00233 223 aa2.55□□□□□ -2
SKP1-204ENST00000517691 PPP6CO00743 305 aa2.55□□□□□ -2
SKP1-204ENST00000517691 OR7A17O14581 309 aa2.55□□□□□ -2
SKP1-204ENST00000517691 HS3ST1O14792 307 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ERI3O43414 337 aaKnown RBP2.55□□□□□ -2
SKP1-204ENST00000517691 FOXS1O43638 330 aa2.55□□□□□ -2
SKP1-204ENST00000517691 KLK8O60259 260 aa2.55□□□□□ -2
SKP1-204ENST00000517691 RDH16O75452 317 aa2.55□□□□□ -2
SKP1-204ENST00000517691 CREG1O75629 220 aa2.55□□□□□ -2
SKP1-204ENST00000517691 RHBDL1O75783 438 aa2.55□□□□□ -2
SKP1-204ENST00000517691 CDC123O75794 336 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 NKX2-2O95096 273 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SERPINA3P01011 423 aa2.55□□□□□ -2
SKP1-204ENST00000517691 JUNP05412 331 aaKnown RBP2.55□□□□□ -2
SKP1-204ENST00000517691 SERPINA6P08185 405 aa2.55□□□□□ -2
SKP1-204ENST00000517691 RAB40ALP0C0E4 278 aa2.55□□□□□ -2
SKP1-204ENST00000517691 HPGDP15428 266 aa2.55□□□□□ -2
SKP1-204ENST00000517691 CREB1P16220 341 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ZNF3P17036 446 aa2.55□□□□□ -2
SKP1-204ENST00000517691 WT1P19544 449 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 CD22P20273 847 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ITGAXP20702 1163 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ZNF10P21506 573 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 HMOX2P30519 316 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SERPINB1P30740 379 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ALDH3A1P30838 453 aa2.55□□□□□ -2
SKP1-204ENST00000517691 MTNR1AP48039 350 aa2.55□□□□□ -2
SKP1-204ENST00000517691 MEOX1P50221 254 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ZNF134P52741 427 aa2.55□□□□□ -2
SKP1-204ENST00000517691 RRADP55042 308 aa2.55□□□□□ -2
SKP1-204ENST00000517691 MTTPP55157 894 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ACTR3P61158 418 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SKP1P63208 163 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SLC18A2Q05940 514 aa2.55□□□□□ -2
SKP1-204ENST00000517691 KLC1Q07866 573 aa2.55□□□□□ -2
SKP1-204ENST00000517691 TGM3Q08188 693 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ASPHQ12797 758 aa2.55□□□□□ -2
SKP1-204ENST00000517691 LCP2Q13094 533 aa2.55□□□□□ -2
SKP1-204ENST00000517691 FAM53BQ14153 422 aa2.55□□□□□ -2
SKP1-204ENST00000517691 NCF4Q15080 339 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SYT16Q17RD7 645 aa2.55□□□□□ -2
SKP1-204ENST00000517691 UNC50Q53HI1 259 aa2.55□□□□□ -2
SKP1-204ENST00000517691 VWA2Q5GFL6 755 aa2.55□□□□□ -2
SKP1-204ENST00000517691 PRAMEF20Q5VT98 475 aa2.55□□□□□ -2
SKP1-204ENST00000517691 HHATQ5VTY9 493 aa2.55□□□□□ -2
SKP1-204ENST00000517691 TMEM211Q6ICI0 200 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ADNP2Q6IQ32 1131 aa2.55□□□□□ -2
SKP1-204ENST00000517691 HMBOX1Q6NT76 420 aa2.55□□□□□ -2
SKP1-204ENST00000517691 METTL2BQ6P1Q9 378 aaKnown RBP2.55□□□□□ -2
SKP1-204ENST00000517691 TRIM40Q6P9F5 258 aa2.55□□□□□ -2
SKP1-204ENST00000517691 AAGABQ6PD74 315 aa2.55□□□□□ -2
SKP1-204ENST00000517691 TMEM88Q6PEY1 159 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SH2D5Q6ZV89 423 aa2.55□□□□□ -2
SKP1-204ENST00000517691 GPRIN3Q6ZVF9 776 aa2.55□□□□□ -2
SKP1-204ENST00000517691 MOB3CQ70IA8 216 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ADGRE4PQ86SQ3 457 aa2.55□□□□□ -2
SKP1-204ENST00000517691 EXOC3L1Q86VI1 746 aa2.55□□□□□ -2
SKP1-204ENST00000517691 GRAMD2AQ8IUY3 354 aa2.55□□□□□ -2
SKP1-204ENST00000517691 NUDCD3Q8IVD9 361 aa2.55□□□□□ -2
SKP1-204ENST00000517691 C10orf107Q8IVU9 208 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.55□□□□□ -2
SKP1-204ENST00000517691 SLC43A2Q8N370 569 aa2.55□□□□□ -2
SKP1-204ENST00000517691 RNF175Q8N4F7 328 aa2.55□□□□□ -2
SKP1-204ENST00000517691 METTL25Q8N6Q8 603 aa2.55□□□□□ -2
SKP1-204ENST00000517691 OR4F6Q8NGB9 312 aa2.55□□□□□ -2
SKP1-204ENST00000517691 OR52B6Q8NGF0 335 aa2.55□□□□□ -2
SKP1-204ENST00000517691 RDH11Q8TC12 318 aa2.55□□□□□ -2
SKP1-204ENST00000517691 NT5CQ8TCD5 201 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ZNF483Q8TF39 744 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 DVL3Q92997 716 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 EFHD2Q96C19 240 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 C11orf24Q96F05 449 aaPredicted RBP2.55□□□□□ -2
SKP1-204ENST00000517691 CMTM7Q96FZ5 175 aa2.55□□□□□ -2
SKP1-204ENST00000517691 PGM2Q96G03 612 aa2.55□□□□□ -2
SKP1-204ENST00000517691 SLC45A3Q96JT2 553 aa2.55□□□□□ -2
SKP1-204ENST00000517691 C10orf90Q96M02 699 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ZNF285Q96NJ3 590 aa2.55□□□□□ -2
SKP1-204ENST00000517691 CCT7Q99832 543 aa2.55□□□□□ -2
SKP1-204ENST00000517691 CENPKQ9BS16 269 aa2.55□□□□□ -2
SKP1-204ENST00000517691 HDHD5Q9BXW7 423 aa2.55□□□□□ -2
SKP1-204ENST00000517691 OR10A2Q9H208 303 aa2.55□□□□□ -2
SKP1-204ENST00000517691 OR51B5Q9H339 312 aa2.55□□□□□ -2
SKP1-204ENST00000517691 GSTO2Q9H4Y5 243 aa2.55□□□□□ -2
SKP1-204ENST00000517691 ELOVL6Q9H5J4 265 aa2.55□□□□□ -2
SKP1-204ENST00000517691 NT5DC2Q9H857 520 aa2.55□□□□□ -2
SKP1-204ENST00000517691 METTL7AQ9H8H3 244 aa2.55□□□□□ -2
SKP1-204ENST00000517691 GPN1Q9HCN4 374 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms