RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 ZNF74Q16587 644 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC25A52Q3SY17 297 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 XKR4Q5GH76 650 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SOHLH1Q5JUK2 328 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 REEP3Q6NUK4 255 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 FAM171BQ6P995 826 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ULK3Q6PHR2 472 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PAQR6Q6TCH4 344 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PARM1Q6UWI2 310 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TMIGD1Q6UXZ0 262 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF730Q6ZMV8 503 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 Q6ZTK2 550 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ASB18Q6ZVZ8 466 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PAGE2Q7Z2X7 111 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ODF3L1Q8IXM7 274 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PELI3Q8N2H9 469 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CSNK1A1LQ8N752 337 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF781Q8N8C0 355 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PRR26Q8N8Z3 221 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SYT8Q8NBV8 401 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC37A3Q8NCC5 494 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 B3GNT7Q8NFL0 401 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR8J2Q8NGG1 315 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR5L2Q8NGL0 311 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF461Q8TAF7 563 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CAPSLQ8WWF8 208 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 IGFBPL1Q8WX77 278 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 UBE2E3Q969T4 207 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 RTP4Q96DX8 246 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ABHD8Q96I13 439 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PLEKHA8Q96JA3 519 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 JSRP1Q96MG2 331 aaPredicted RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CNN2Q99439 309 aaKnown RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 NEURL2Q9BR09 285 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC30A2Q9BRI3 323 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 MLST8Q9BVC4 326 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLITRK2Q9H156 845 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 GBA3Q9H227 469 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PPA2Q9H2U2 334 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 CPVLQ9H3G5 476 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 BICC1Q9H694 974 aaKnown RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZC4H2Q9NQZ6 224 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TMEM30AQ9NV96 361 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 BFARQ9NZS9 450 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC17A7Q9P2U7 560 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TUBGCP4Q9UGJ1 667 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PURGQ9UJV8 347 aaKnown RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 MYO6Q9UM54 1294 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 PDE10AQ9Y233 779 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 EIF3LQ9Y262 564 aaKnown RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 TNFRSF18Q9Y5U5 241 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 POLR3AO14802 1390 aaPredicted RBP3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZMYM2Q9UBW7 1377 aa3.48□□□□□ -1.85
RNU4-60P-201ENST00000517239 NPIPA5A0A0B4J1W7 369 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 IGHV4-28A0A0C4DH34 117 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 LOC101059948A0A1B0GTJ6 334 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 GOLGA8IPA6NC78 632 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 LRIT2A6NDA9 550 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF814B7Z6K7 855 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 NPIPA5E9PKD4 350 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 K7ERI5 159 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF195O14628 629 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 PSTPIP1O43586 416 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 TRAPPC3O43617 180 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR10H3O60404 316 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 GMDSO60547 372 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 AHSA1O95433 338 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 LATS1O95835 1130 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 CST4P01036 141 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 IFNW1P05000 195 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 PRKCGP05129 697 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 SP1P08047 785 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RD3LP0DJH9 198 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 H2AFXP16104 143 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 PRDX3P30048 256 aaKnown RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 FEN1P39748 380 aaKnown RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ID1P41134 155 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 GNPDA1P46926 289 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RGRP47804 291 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RFX5P48382 616 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 PGFP49763 221 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RGS19P49795 217 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RASSF2P50749 326 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 OR1D5P58170 312 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RPL27P61353 136 aaKnown RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 RPS6P62753 249 aaKnown RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 IRX1P78414 480 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 FOXI1Q12951 378 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 FADDQ13158 208 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 MADCAM1Q13477 382 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 ZNF169Q14929 603 aaPredicted RBP3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 LY6G5CQ5SRR4 150 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 SAPCD1Q5SSQ6 148 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 THEM4Q5T1C6 240 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 STUMQ69YW2 141 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 TRNP1Q6NT89 227 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 HACD2Q6Y1H2 254 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 LRRC74BQ6ZQY2 392 aa3.47□□□□□ -1.85
RNU4-60P-201ENST00000517239 SLC35D2Q76EJ3 337 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms