RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 HOXA6P31267 233 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 COPB2P35606 906 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 RPL4P36578 427 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CEACAM6P40199 344 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 EPS15P42566 896 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CSNK1A1P48729 337 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 EVX1P49640 407 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 GPC3P51654 580 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 NKX2-5P52952 324 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ARFIP1P53367 373 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 METAP1P53582 386 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CASP6P55212 293 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 RPL27P61353 136 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PRR3P79522 188 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 UBXN1Q04323 297 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 WASHC5Q12768 1159 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SMC1AQ14683 1233 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 NPTX1Q15818 432 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CHRNA6Q15825 494 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PGGHGQ32M88 737 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 FAM174BQ3ZCQ3 159 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 FBXL19-AS1Q494R0 122 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SLC9B1Q4ZJI4 515 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 GPAT3Q53EU6 434 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 DDX59Q5T1V6 619 aaKnown RBP eCLIP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PLPP4Q5VZY2 271 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 LGALS9CQ6DKI2 356 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 TMEM184AQ6ZMB5 413 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 RFPL4BQ6ZWI9 263 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 COX8CQ7Z4L0 72 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 VRK2Q86Y07 508 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ARID3BQ8IVW6 561 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CCAR1Q8IX12 1150 aaKnown RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ZNF444Q8N0Y2 327 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SLC43A2Q8N370 569 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CSNK1A1LQ8N752 337 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 OR51G2Q8NGK0 314 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CIRBP-AS1Q8TBR5 109 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 BRSK1Q8TDC3 778 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CD300LFQ8TDQ1 290 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CKAP2Q8WWK9 683 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SMPDL3AQ92484 453 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SHC3Q92529 594 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PSMG2Q969U7 264 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 KIAA1191Q96A73 305 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SDCCAG3Q96C92 435 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ELMOD3Q96FG2 381 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CCDC34Q96HJ3 373 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 NDNQ99608 321 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 HIGD2AQ9BW72 106 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 MAGT1Q9H0U3 335 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ABCG8Q9H221 673 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 C16orf95Q9H693 158 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CHODLQ9H9P2 273 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 POPDC2Q9HBU9 364 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 S100A14Q9HCY8 104 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CHMP1AQ9HD42 196 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 TM9SF3Q9HD45 589 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ISYNA1Q9NPH2 558 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 FANCFQ9NPI8 374 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PHPT1Q9NRX4 125 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 C5AR2Q9P296 337 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SUCLA2Q9P2R7 463 aaPredicted RBP-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 GIMAP2Q9UG22 337 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 APPL1Q9UKG1 709 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 GPR34Q9UPC5 381 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ASF1AQ9Y294 204 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PCDHGB6Q9Y5F9 930 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ALG6Q9Y672 507 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PASKQ96RG2 1323 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 FAT2Q9NYQ8 4349 aa-1.26□□□□□ -2.61
RNU6-1238P-201ENST00000517215 MYOFQ9NZM1 2061 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 MUC17Q685J3 4493 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 TRAV24A0A0B4J272 114 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 C17orf105B2RV13 164 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 EIF3CLB5ME19 914 aaKnown RBP-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 C19orf81C9J6K1 198 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 NPIPA5E9PKD4 350 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 H0YHG0 523 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 H3BMM5 538 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 BPY2O14599 106 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ERI3O43414 337 aaKnown RBP-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PRAMEF11O60813 436 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 PAGE4O60829 102 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 RSL1D1O76021 490 aaKnown RBP-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SLC25A14O95258 325 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 H6PDO95479 791 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 APCSP02743 223 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 TK1P04183 234 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 MMP7P09237 267 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 KDELR1P24390 212 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CHMLP26374 656 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 CST5P28325 142 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 GABRA5P31644 462 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 GCKP35557 465 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 RPL13AP40429 203 aaKnown RBP-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 SLC26A3P40879 764 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 RFX3P48380 749 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 TAS2R19P59542 299 aa-1.27□□□□□ -2.61
RNU6-1238P-201ENST00000517215 ASPHQ12797 758 aa-1.27□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms