RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ANGPT4Q9Y264 503 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 SESN1Q9Y6P5 492 aa-2.08□□□□□ -2.74
RNU6-539P-201ENST00000516665 RTTNQ86VV8 2226 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 IGKV3-7A0A075B6H7 116 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 PAPSS1O43252 624 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 AP5Z1O43299 807 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 ZNF735P0CB33 412 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 SDC1P18827 310 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 BSGP35613 385 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 HMGCS1Q01581 520 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 SULT2A1Q06520 285 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 IL10RBQ08334 325 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 SLC9C2Q5TAH2 1124 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 NCEH1Q6PIU2 408 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 MISPQ8IVT2 679 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 TEX11Q8IYF3 940 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 PRSS58Q8IYP2 241 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 SLC25A45Q8N413 288 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 IPMKQ8NFU5 416 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 IL1F10Q8WWZ1 152 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 TSR2Q969E8 191 aaKnown RBP-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 GPR137Q96N19 417 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 IP6K3Q96PC2 410 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 TSPY26PQ9H489 355 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 DUSP21Q9H596 190 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 PRORYQ9H606 182 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 YY1AP1Q9H869 796 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 PLGRKTQ9HBL7 147 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 HMG20AQ9NP66 347 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 SLC35C2Q9NQQ7 365 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 ELOVL2Q9NXB9 296 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 RIMS3Q9UJD0 308 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 ATG4BQ9Y4P1 393 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 KLK4Q9Y5K2 254 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 HEBP2Q9Y5Z4 205 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 MAD1L1Q9Y6D9 718 aa-2.09□□□□□ -2.74
RNU6-539P-201ENST00000516665 INTS1Q8N201 2190 aaKnown RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ODF3BA8MYP8 253 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 H0YHG0 523 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 SLC19A2O60779 497 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 H6PDO95479 791 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 GPX1P07203 203 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 HEXBP07686 556 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 GZMBP10144 247 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ERCC2P18074 760 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ATF6P18850 670 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 OMGP23515 440 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 PTAFRP25105 342 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 AZGP1P25311 298 aaKnown RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ADSSP30520 456 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 PRKCIP41743 596 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ASCL1P50553 236 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 TAS2R19P59542 299 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 IL5RAQ01344 420 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 MFGE8Q08431 387 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ST3GAL3Q11203 375 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 HES1Q14469 280 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 FAM46CQ5VWP2 391 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ZNF562Q6V9R5 426 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 Q6ZRG5 221 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 LUZP1Q86V48 1076 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 FAM184AQ8NB25 1140 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 OR5L2Q8NGL0 311 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ARPC1AQ92747 370 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 EMG1Q92979 244 aaKnown RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 OTUB1Q96FW1 271 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 AMDHD1Q96NU7 426 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 MUS81Q96NY9 551 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 PARP12Q9H0J9 701 aaKnown RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 DSN1Q9H410 356 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 DNAJC17Q9NVM6 304 aaKnown RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 TAS2R10Q9NYW0 307 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 RNF14Q9UBS8 474 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 DNPEPQ9ULA0 475 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 ASF1AQ9Y294 204 aa-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 SETD2Q9BYW2 2564 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-539P-201ENST00000516665 SH3TC1Q8TE82 1336 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 EPPK1P58107 5090 aaKnown RBP-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 FKBP6O75344 327 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 PGK2P07205 417 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 GJB2P29033 226 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 MAGEA8P43361 318 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 CDKL1Q00532 357 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 REG3AQ06141 175 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 WASHC5Q12768 1159 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 VGLL4Q14135 290 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 ODR4Q5SWX8 454 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 C1orf146Q5VVC0 180 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 KLHL10Q6JEL2 608 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 ALKBH5Q6P6C2 394 aaKnown RBP-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 PEX5LQ8IYB4 626 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 Q8N6K4 173 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 SPATA5Q8NB90 893 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 OR9A2Q8NGT5 310 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 ATL1Q8WXF7 558 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 PRCCQ92733 491 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 SLC25A46Q96AG3 418 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 TSG101Q99816 390 aa-2.11□□□□□ -2.75
RNU6-539P-201ENST00000516665 TIMM21Q9BVV7 248 aa-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms