RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CYP7B1O75881 506 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CPSF4O95639 269 aaKnown RBP12.24□□□□□ -0.45
TCOF1-215ENST00000515516 DHRS4L1P0CG22 281 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 UBL4AP11441 157 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 PPP3CBP16298 524 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 IL11P20809 199 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CRYGSP22914 178 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CCR4P51679 360 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CLNS1AP54105 237 aaKnown RBP12.24□□□□□ -0.45
TCOF1-215ENST00000515516 RPS26P62854 115 aaKnown RBP12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CBFBQ13951 182 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 GUSBP1Q15486 140 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 GPR68Q15743 365 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CTU2Q2VPK5 515 aaKnown RBP12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CBLN3Q6UW01 205 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 BEND4Q6ZU67 534 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 LRRC34Q8IZ02 419 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 ANKRD42Q8N9B4 389 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 ATP6V1C2Q8NEY4 427 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 OR5W2Q8NH69 310 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 CPNE4Q96A23 557 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-215ENST00000515516 PIK3IP1Q96FE7 263 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 ZC3HAV1LQ96H79 300 aaKnown RBP12.24□□□□□ -0.45
TCOF1-215ENST00000515516 SDF2Q99470 211 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 NPAS1Q99742 590 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 NUF2Q9BZD4 464 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 NMUR2Q9GZQ4 415 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 KIAA1549Q9HCM3 1950 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 BEX4Q9NWD9 120 aaPredicted RBP12.24□□□□□ -0.45
TCOF1-215ENST00000515516 ICAM5Q9UMF0 924 aa12.24□□□□□ -0.45
TCOF1-215ENST00000515516 SERINC4A6NH21 518 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 KLK2P20151 261 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 UQCRC2P22695 453 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 SLC7A1P30825 629 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 S100A3P33764 101 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 CHI3L1P36222 383 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-215ENST00000515516 RNPS1Q15287 305 aaKnown RBP12.23□□□□□ -0.45
TCOF1-215ENST00000515516 DPY19L1Q2PZI1 675 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 ARHGAP11BQ3KRB8 267 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 TMEM176BQ3YBM2 270 aaPredicted RBP12.23□□□□□ -0.45
TCOF1-215ENST00000515516 TMEM201Q5SNT2 666 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.23□□□□□ -0.45
TCOF1-215ENST00000515516 PDZK1Q5T2W1 519 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 ANKRD34AQ69YU3 496 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 ZNF550Q7Z398 422 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 ANKRD46Q86W74 232 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 CLEC4FQ8N1N0 589 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 GPR119Q8TDV5 335 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 XAGE5Q8WWM1 108 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 TESCQ96BS2 214 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 ZBTB9Q96C00 473 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 MRGPRX4Q96LA9 322 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 SORT1Q99523 831 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 C20orf27Q9GZN8 174 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 OR51I1Q9H343 314 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 PNPOQ9NVS9 261 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 SPG11Q96JI7 2443 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 F8P00451 2351 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 MED12Q93074 2177 aa12.23□□□□□ -0.45
TCOF1-215ENST00000515516 NPIPB9F8W1W9 429 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 OIP5O43482 229 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 CSTAP01040 98 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 PRKCAP17252 672 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 FPR1P21462 350 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 BST1Q10588 318 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 SELENBP1Q13228 472 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 QPRTQ15274 297 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 NDUFAF6Q330K2 333 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 EIF3MQ7L2H7 374 aaKnown RBP12.22□□□□□ -0.45
TCOF1-215ENST00000515516 SPATA19Q7Z5L4 167 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 TRIML2Q8N7C3 387 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 TMEM234Q8WY98 164 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 ROBO4Q8WZ75 1007 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 ARSGQ96EG1 525 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 ZBTB18Q99592 522 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 KLHDC3Q9BQ90 382 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 LAT2Q9GZY6 243 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 C12orf49Q9H741 205 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 MEAF6Q9HAF1 191 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 SERINC1Q9NRX5 453 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 HAO1Q9UJM8 370 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 MKLN1Q9UL63 735 aa12.22□□□□□ -0.45
TCOF1-215ENST00000515516 TEP1Q99973 2627 aaKnown RBP12.22□□□□□ -0.45
TCOF1-215ENST00000515516 TRPC5OSA6NMA1 111 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 DEFB108AA8MXU0 73 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 E9PBE3 544 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ARHGEF9O43307 516 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 FCMRO60667 390 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 PRKD3O94806 890 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 OR12D1P0DN82 309 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 CD53P19397 219 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 AGTR1P30556 359 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 KHKP50053 298 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ANXA11P50995 505 aaKnown RBP12.21□□□□□ -0.45
TCOF1-215ENST00000515516 CASP9P55211 416 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 NME5P56597 212 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 ADAM8P78325 824 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 HPCAP84074 193 aa12.21□□□□□ -0.45
TCOF1-215ENST00000515516 FOXD4Q12950 439 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms