RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 OR5W2Q8NH69 310 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 B4GALNT2Q8NHY0 566 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 PNPLA2Q96AD5 504 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 MIB2Q96AX9 1013 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 TAMM41Q96BW9 452 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 SCMH1Q96GD3 660 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 PYURFQ96I23 114 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF597Q96LX8 424 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 FRMD6Q96NE9 622 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 YY1AP1Q9H869 796 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 GALNT9Q9HCQ5 603 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 ZFP64Q9NPA5 681 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 EXOSC3Q9NQT5 275 aaKnown RBP9.27□□□□□ -0.93
NEDD9-214ENST00000513989 OLAHQ9NV23 265 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 FLRT3Q9NZU0 649 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 SELENONQ9NZV5 590 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 GMPR2Q9P2T1 348 aaKnown RBP9.27□□□□□ -0.93
NEDD9-214ENST00000513989 SLC7A8Q9UHI5 535 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 CARD8Q9Y2G2 431 aa9.27□□□□□ -0.93
NEDD9-214ENST00000513989 FAM32AQ9Y421 112 aaKnown RBP9.27□□□□□ -0.93
NEDD9-214ENST00000513989 A0A087WZY1 265 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 IGLV3-32A0A0A0MS00 114 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 CDHR4A6H8M9 788 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 C2orf72A6NCS6 295 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 G3V3Y1 287 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 ACOT7O00154 380 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 AP3D1O14617 1153 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 ACOT8O14734 319 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GNB5O14775 395 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 TRIM3O75382 744 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GCM2O75603 506 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 RASAL1O95294 804 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 CRYABP02511 175 aaKnown RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 UBTFL6P0CB48 400 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 PGCP20142 388 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GCKP35557 465 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 CD97P48960 835 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 P2RX1P51575 399 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 CCR4P51679 360 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GAS1P54826 345 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 MS4A2Q01362 244 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 CHRNB3Q05901 458 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GANABQ14697 944 aaKnown RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 TOMM20Q15388 145 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 DUSP7Q16829 419 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 IFI44LQ53G44 452 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 MRPL2Q5T653 305 aaKnown RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 BICRALQ6AI39 1079 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 LCN8Q6JVE9 175 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 RPUSD3Q6P087 351 aaKnown RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 APOOLQ6UXV4 268 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF836Q6ZNA1 936 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 HMGN2P46Q86SG4 172 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 RANBP3LQ86VV4 465 aaPredicted RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 CYP4Z1Q86W10 505 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 CLIP4Q8N3C7 705 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GATSQ8NAP1 163 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 OR2M7Q8NG81 312 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF563Q8TA94 476 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 RNF138Q8WVD3 245 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GEMIN6Q8WXD5 167 aaKnown RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 TMEM234Q8WY98 164 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 RSRC1Q96IZ7 334 aaKnown RBP9.26□□□□□ -0.93
NEDD9-214ENST00000513989 GNRHR2Q96P88 292 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF559Q9BR84 538 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 MFRPQ9BY79 579 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 TRIM2Q9C040 744 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 DSN1Q9H410 356 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 TMEM27Q9HBJ8 222 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 RLIMQ9NVW2 624 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 STOML1Q9UBI4 398 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 RPS6KB2Q9UBS0 482 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 KCNE5Q9UJ90 142 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 SH3GLB1Q9Y371 365 aa9.26□□□□□ -0.93
NEDD9-214ENST00000513989 SVILO95425 2214 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 CSMD1Q96PZ7 3565 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 SNPHO15079 494 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 TPST1O60507 370 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 TRAPPC6AO75865 159 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 PRKD3O94806 890 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 SORBS2O94875 1100 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 OPN1SWP03999 348 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 IFNW1P05000 195 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 GPIP06744 558 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 CD247P20963 164 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 PSMA4P25789 261 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 PTGDSP41222 190 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 EIF1P41567 113 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 DNASE1L1P49184 302 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 MEOX1P50221 254 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 ZNF41P51814 821 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 MLLT10P55197 1068 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 DSCR4P56555 118 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 RGS8P57771 180 aaPredicted RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 GPR85P60893 370 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 PPIAP62937 165 aaKnown RBP9.25□□□□□ -0.93
NEDD9-214ENST00000513989 KLRB1Q12918 225 aa9.25□□□□□ -0.93
NEDD9-214ENST00000513989 SLC10A1Q14973 349 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms