RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZNF582Q96NG8 517 aaPredicted RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 OR6C1Q96RD1 312 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 NUDT9Q9BW91 350 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 DPH1Q9BZG8 443 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 SLC7A5P2Q9GIP4 190 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 C20orf141Q9NUB4 165 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 MED17Q9NVC6 651 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 SIDT1Q9NXL6 827 aaKnown RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 MKL2Q9ULH7 1088 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 MED31Q9Y3C7 131 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 NCOR1O75376 2440 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 MYO15AQ9UKN7 3530 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 ARHGAP33O14559 1287 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 SLC22A1O15245 554 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 CNOT3O75175 753 aaKnown RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 CSTAP01040 98 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 CD36P16671 472 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 ZNF182P17025 639 aaPredicted RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 PTNP21246 168 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 LIPAP38571 399 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 OCA2Q04671 838 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 SPCS2Q15005 226 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 EBPQ15125 230 aaKnown RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 CLEC12AQ5QGZ9 265 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 FNDC7Q5VTL7 733 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 RNLSQ5VYX0 342 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 SLC30A6Q6NXT4 461 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 LINC00114Q6XXX2 140 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 ZNF440Q8IYI8 595 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 GRHL3Q8TE85 626 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 MEPEQ9NQ76 525 aaPredicted RBP13.76□□□□□ -0.21
VCAN-211ENST00000513984 UBQLN4Q9NRR5 601 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 RARRES3Q9UL19 164 aa13.76□□□□□ -0.21
VCAN-211ENST00000513984 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 KDM4EB2RXH2 506 aaPredicted RBP13.75□□□□□ -0.21
VCAN-211ENST00000513984 M0R296 226 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 SURF4O15260 269 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 PRODHO43272 600 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 TIAF1O95411 115 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 BCL10O95999 233 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 NR4A1P22736 598 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 LCN1P31025 176 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 FXYD6P3P58550 94 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 ALG10BQ5I7T1 473 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 RPL13AP3Q6NVV1 102 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 C9orf40Q8IXQ3 194 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 PRSS58Q8IYP2 241 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 CDK20Q8IZL9 346 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 ZNF527Q8NB42 609 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 SLC38A9Q8NBW4 561 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 OR2T33Q8NG76 320 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 OR1N1Q8NGS0 311 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 STT3BQ8TCJ2 826 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 BPIFA2Q96DR5 249 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 TMEM80Q96HE8 168 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 OR52D1Q9H346 318 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 ATP13A2Q9NQ11 1180 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 MRPS18AQ9NVS2 196 aaKnown RBP13.75□□□□□ -0.21
VCAN-211ENST00000513984 TAS2R16Q9NYV7 291 aa13.75□□□□□ -0.21
VCAN-211ENST00000513984 MRTO4Q9UKD2 239 aaKnown RBP13.75□□□□□ -0.21
VCAN-211ENST00000513984 C2orf92A0A1B0GVN3 265 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 OR6C76A6NM76 312 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 SNTNA6NMZ2 147 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 TO15178 435 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 PRKNO60260 465 aaPredicted RBP13.74□□□□□ -0.21
VCAN-211ENST00000513984 SCRG1O75711 98 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 ONECUT2O95948 504 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 SYPP08247 313 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 ZGLP1P0C6A0 271 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 TBXA2RP21731 343 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 CSTF2P33240 577 aaKnown RBP eCLIP13.74□□□□□ -0.21
VCAN-211ENST00000513984 ULK3Q6PHR2 472 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 KIRREL2Q6UWL6 708 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 SLC46A3Q7Z3Q1 461 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 BMP8AQ7Z5Y6 402 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 CYP4Z2PQ8N1L4 340 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 FANK1Q8TC84 345 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 HHATLQ9HCP6 504 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 COPS7AQ9UBW8 275 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 KPNA4O00629 521 aaPredicted RBP13.74□□□□□ -0.21
VCAN-211ENST00000513984 RFPL3O75679 317 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 UTS2O95399 124 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 HMGN1P05114 100 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 CDK4P11802 303 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 DUSP3P51452 185 aaPredicted RBP13.74□□□□□ -0.21
VCAN-211ENST00000513984 DAB2P98082 770 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 TMEM44Q2T9K0 475 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 NDUFAF6Q330K2 333 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 NKAIN1Q4KMZ8 207 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 ZNF385CQ66K41 422 aaPredicted RBP13.74□□□□□ -0.21
VCAN-211ENST00000513984 PWWP2BQ6NUJ5 590 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 LANCL3Q6ZV70 420 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 ANKK1Q8NFD2 765 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 GAL3ST4Q96RP7 486 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 WWTR1Q9GZV5 400 aa13.74□□□□□ -0.21
VCAN-211ENST00000513984 UBQLN3Q9H347 655 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms