RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ROPN1LQ96C74 230 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ARSGQ96EG1 525 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF317Q96PQ6 595 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 TTYH2Q9BSA4 534 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 INPP5KQ9BT40 448 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 TMEM120AQ9BXJ8 343 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 UGT2B28Q9BY64 529 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 PAIP1Q9H074 479 aaKnown RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 NSRP1Q9H0G5 558 aaKnown RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 DSN1Q9H410 356 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 CALHM2Q9HA72 323 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 CHST11Q9NPF2 352 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 SLC52A3Q9NQ40 469 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 EXOSC3Q9NQT5 275 aaKnown RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 PNPLA3Q9NST1 481 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 PAQR5Q9NXK6 330 aaPredicted RBP7.42□□□□□ -1.22
NEDD4-210ENST00000513957 FLRT3Q9NZU0 649 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 SH3BGRL2Q9UJC5 107 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 NDUFAF1Q9Y375 327 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 AP4B1Q9Y6B7 739 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 HCFC1P51610 2035 aa7.42□□□□□ -1.22
NEDD4-210ENST00000513957 MBD3L4A6NDZ8 208 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MBD3L3A6NE82 208 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 SERINC4A6NH21 518 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MBD3L5A6NJ08 208 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 GJE1A6NN92 205 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 HSPB2A8KAH6 182 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 GTPBP1O00178 669 aaKnown RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CLIC1O00299 241 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ETV2O00321 342 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 HCRTR2O43614 444 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 DNAJA2O60884 412 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 UGT2B17O75795 530 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CLDN14O95500 239 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 THBS1P07996 1170 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 NR2F1P10589 423 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 GP1BBP13224 206 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 UQCRBP14927 111 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF708P17019 499 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 HK1P19367 917 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CAPN3P20807 821 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 RPS4Y1P22090 263 aaKnown RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 FKBP2P26885 142 aaKnown RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 SLC6A8P48029 635 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 LHX2P50458 406 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MVDP53602 400 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 DLX5P56178 289 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 B3GALT5-AS1P59052 145 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 DSTNP60981 165 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ADORA2A-AS1P86434 159 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF117Q03924 483 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 FUT5Q11128 374 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CBFBQ13951 182 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 RGNQ15493 299 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 GPR68Q15743 365 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CD226Q15762 336 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 HSPB2Q16082 182 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 TMEM44Q2T9K0 475 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 PLPPR5Q32ZL2 321 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ACSF3Q4G176 576 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 GPAT3Q53EU6 434 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 PDZK1Q5T2W1 519 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 NSUN5P2Q63ZY6 315 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 OR5M10Q6IEU7 315 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF585AQ6P3V2 769 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 FRRS1Q6ZNA5 592 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 EIF3MQ7L2H7 374 aaKnown RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MRGPRGQ86SM5 289 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ADGRE4PQ86SQ3 457 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 YRDCQ86U90 279 aaKnown RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MED12LQ86YW9 2145 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ZNF440Q8IYI8 595 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CLEC4FQ8N1N0 589 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MEIOBQ8N635 442 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 OR5W2Q8NH69 310 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MBD3L2Q8NHZ7 208 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 TMEM234Q8WY98 164 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ST8SIA1Q92185 356 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 SLC35B4Q969S0 331 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 OTUB1Q96FW1 271 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 WDYHV1Q96HA8 205 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MRGPRX4Q96LA9 322 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CLUHP3Q96NS8 147 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 RTN4RQ9BZR6 473 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 LAT2Q9GZY6 243 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ARMC7Q9H6L4 198 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MTHFD2LQ9H903 347 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 CACYBPQ9HB71 228 aaKnown RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 A4GALTQ9NPC4 353 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 BRD7Q9NPI1 651 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 FBXO34Q9NWN3 711 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 MED11Q9P086 117 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 PLEKHB1Q9UF11 243 aaPredicted RBP7.41□□□□□ -1.22
NEDD4-210ENST00000513957 ICAM5Q9UMF0 924 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 SLC6A5Q9Y345 797 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 L3MBTL1Q9Y468 752 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 FAM215AQ9Y5M1 114 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 KCNE3Q9Y6H6 103 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 DSPPQ9NZW4 1301 aa7.41□□□□□ -1.22
NEDD4-210ENST00000513957 SPTAN1Q13813 2472 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms