RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 SLITRK4Q8IW52 837 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 SLC43A2Q8N370 569 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR14A16Q8NHC5 309 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 C16orf52Q8NHV5 167 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 OSTF1Q92882 214 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 COG8Q96MW5 612 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 CCNL2Q96S94 520 aaPredicted RBP12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 CNPPD1Q9BV87 410 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 TGIF2Q9GZN2 237 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 TMEM27Q9HBJ8 222 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 FGF21Q9NSA1 209 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 MED17Q9NVC6 651 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 KCNE5Q9UJ90 142 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 MRTO4Q9UKD2 239 aaKnown RBP12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 ERVK-19Q9WJR5 959 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 RPL36Q9Y3U8 105 aaKnown RBP12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 RELNP78509 3460 aa12.11□□□□□ -0.47
DEPDC1B-206ENST00000512452 LY6G6EA0A0G2JKS1 128 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 TCRBV16S1A1N1A0A5B0 115 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 HTR3EA5X5Y0 456 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 SNTNA6NMZ2 147 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 EFCAB7A8K855 629 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 C17orf105B2RV13 164 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 PEX12O00623 359 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 POLR1CO15160 346 aaPredicted RBP12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CDC123O75794 336 aaPredicted RBP12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 LYPD3O95274 346 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CLPSP04118 112 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CT45A8P0DMV1 189 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CT45A9P0DMV2 189 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CCNA2P20248 432 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 ALAS2P22557 587 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 ADH7P40394 386 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 RBM34P42696 430 aaKnown RBP12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 PPICP45877 212 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 PCYT1AP49585 367 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 DUSP3P51452 185 aaPredicted RBP12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 RHAGQ02094 409 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 PIGFQ07326 219 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 ERV3-1Q14264 604 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 IRF3Q14653 427 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 GINS1Q14691 196 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR1Q1Q15612 314 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CT45A2Q5DJT8 189 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 MFSD4BQ5TF39 518 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 RPL13AP3Q6NVV1 102 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 NPSR1Q6W5P4 371 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 ARHGAP22Q7Z5H3 698 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 TMEM151BQ8IW70 566 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 STX19Q8N4C7 294 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 METTL27Q8N6F8 245 aaPredicted RBP12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 LSMEM1Q8N8F7 131 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 RCBTB1Q8NDN9 531 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 PLPP5Q8NEB5 264 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 PTPMT1Q8WUK0 201 aaPredicted RBP12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 SLC38A2Q96QD8 506 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 NUDT22Q9BRQ3 303 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CDCA4Q9BXL8 241 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CAPN10Q9HC96 672 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 FBXO34Q9NWN3 711 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 AASSQ9UDR5 926 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 WARS2Q9UGM6 360 aaKnown RBP12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 ENPP5Q9UJA9 477 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 CBLCQ9ULV8 474 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 SLC35A3Q9Y2D2 325 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 U3KQA8 63 aa12.1□□□□□ -0.47
DEPDC1B-206ENST00000512452 NUP210LQ5VU65 1888 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 IGLV3-12A0A075B6K2 115 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 NBPF19A0A087WUL8 3843 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 CENPVL1A0A0U1RR11 272 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 FRG2CA6NGY1 282 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR6C76A6NM76 312 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 ARHGAP33O14559 1287 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 SIGLEC6O43699 453 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 CBFA2T3O75081 653 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 INMTO95050 263 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 GABARAPO95166 117 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 SOX14O95416 240 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 ONECUT2O95948 504 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 THY1P04216 161 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 IGKV3-11P04433 115 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 CYC1P08574 325 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 HBQ1P09105 142 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 HTR2AP28223 471 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 PEX19P40855 299 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 OR1D4P47884 311 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 PGDP52209 483 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 EFNB1P98172 346 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 PRKCDQ05655 676 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 SNAP47Q5SQN1 464 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 ARHGAP40Q5TG30 622 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 TMEM236Q5W0B7 351 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 SLC27A4Q6P1M0 643 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 GUSBP11Q6P575 273 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 ZNF367Q7RTV3 350 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 NKAIN4Q8IVV8 208 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
DEPDC1B-206ENST00000512452 CYP4Z2PQ8N1L4 340 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms