RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 PRODH2Q9UF12 536 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 ENPP4Q9Y6X5 453 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 SCN3AQ9NY46 2000 aa9.61□□□□□ -0.87
PDLIM5-217ENST00000512274 CSPG4Q6UVK1 2322 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 E9PQ18 207 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 G3V2T6 193 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 SOCS2O14508 198 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 DYRK3O43781 588 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 KIAA0513O60268 411 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 TPST1O60507 370 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 TOXO94900 526 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 LGI1O95970 557 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 IGKV3-11P04433 115 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 IFNW1P05000 195 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 FESP07332 822 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 HOXD4P09016 255 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 ALOX5P09917 674 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 ACP2P11117 423 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 NT5EP21589 574 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 MSX1P28360 303 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 TRHRP34981 398 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 EMDP50402 254 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 ARHGDIAP52565 204 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 DCAF7P61962 342 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 MRPS35P82673 323 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 MED21Q13503 144 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 DAG1Q14118 895 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 NRF1Q16656 503 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 DUSP7Q16829 419 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 TRMT12Q53H54 448 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 KRTCAP3Q53RY4 240 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF766Q5HY98 468 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 RNF220Q5VTB9 566 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 FRRS1Q6ZNA5 592 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 VTCN1Q7Z7D3 282 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 CHERPQ8IWX8 916 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 OR4N5Q8IXE1 308 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF615Q8N8J6 731 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 GPR32P1Q8NGA4 272 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 OR5D16Q8NGK9 328 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 OR14A16Q8NHC5 309 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 THAP3Q8WTV1 239 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 TFAP2CQ92754 450 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 PROX1Q92786 737 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 RAB8BQ92930 207 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 RMND5BQ96G75 393 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 C16orf58Q96GQ5 468 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 SDF2Q99470 211 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 CRB3Q9BUF7 120 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 RBCK1Q9BYM8 510 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 ANKRD19PQ9H560 264 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 KCNJ16Q9NPI9 418 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 KLHL1Q9NR64 748 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 SMPD3Q9NY59 655 aaPredicted RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 TRPC4Q9UBN4 977 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 NXT1Q9UKK6 140 aaKnown RBP9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 ABCG2Q9UNQ0 655 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 SLC9A8Q9Y2E8 581 aa9.6□□□□□ -0.87
PDLIM5-217ENST00000512274 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 NSG1A0A0A6YYJ2 146 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 A0A1W2PQ72 361 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 C7orf72A4D263 438 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 OR5H15A6NDH6 313 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 OR2W5A6NFC9 320 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 PRAMEF25A6NGN4 478 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 AGAP5A6NIR3 686 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 OR6C76A6NM76 312 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 PRRG2O14669 202 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 EI24O14681 340 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 FMO6PO60774 539 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 CTAG2O75638 210 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 H6PDO95479 791 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 CT62P0C5K7 136 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 PABPC4LP0CB38 370 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 ITGAMP11215 1152 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNF23P17027 643 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 PSMD4P55036 377 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 SMIM11AP58511 58 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 HPCAP84074 193 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 PSG6Q00889 435 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 TFF3Q07654 80 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 SNTB1Q13884 538 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 ZNHIT3Q15649 155 aaPredicted RBP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 DUSP5Q16690 384 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 LRRC36Q1X8D7 754 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 CYP27C1Q4G0S4 372 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 EIPR1Q53HC9 387 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 TYW3Q6IPR3 259 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 FAHD1Q6P587 224 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 USP51Q70EK9 711 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 C16orf62Q7Z3J2 963 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 CARM1Q86X55 608 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 GRAMD2AQ8IUY3 354 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 CMIPQ8IY22 773 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 LINC00471Q8N535 108 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 OR4C15Q8NGM1 316 aa9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 DAZLQ92904 295 aaKnown RBP9.59□□□□□ -0.87
PDLIM5-217ENST00000512274 COL21A1Q96P44 957 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms