RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SCNM1Q9BWG6 230 aa11.96□□□□□ -0.49
HMGB2-205ENST00000511316 H2AFY2Q9P0M6 372 aaPredicted RBP11.96□□□□□ -0.49
HMGB2-205ENST00000511316 SLC23A2Q9UGH3 650 aa11.96□□□□□ -0.49
HMGB2-205ENST00000511316 DNMT3AQ9Y6K1 912 aaPredicted RBP11.96□□□□□ -0.49
HMGB2-205ENST00000511316 PTPRBP23467 1997 aa11.96□□□□□ -0.5
HMGB2-205ENST00000511316 PLPP1O14494 284 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 SH3BGRLO75368 114 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 KLHL18O94889 574 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 AGR2O95994 175 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 FPR3P25089 353 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 HTR1FP30939 366 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 BSGP35613 385 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 OR3A3P47888 321 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 GAS1P54826 345 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 CDH11P55287 796 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 RPS25P62851 125 aaKnown RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 REEP5Q00765 189 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 CYP27C1Q4G0S4 372 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 CCDC58Q4VC31 144 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 HBMQ6B0K9 141 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 SIGIRRQ6IA17 410 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 GUSBP11Q6P575 273 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 DHRS13Q6UX07 377 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 TMPRSS7Q7RTY8 843 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 ARIH2OSQ8N7S6 290 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 TM9SF4Q92544 642 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 OR2AG1Q9H205 316 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 FN3KQ9H479 309 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 DDX31Q9H8H2 851 aaKnown RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 SIRT3Q9NTG7 399 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 COMMD3Q9UBI1 195 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 CDH10Q9Y6N8 788 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 ACACBO00763 2458 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 COL27A1Q8IZC6 1860 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 A0A1B0GVI7 797 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 A6NCN8 305 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 B8ZZF3 427 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 CPNE3O75131 537 aaKnown RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 RFPL3O75679 317 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 RGS9O75916 674 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 CTSEP14091 401 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 ACADLP28330 430 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 MAN2A2P49641 1150 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 CASP9P55211 416 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 ABATP80404 500 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 PRR5P85299 388 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 PITPNAQ00169 270 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 TSTA3Q13630 321 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 ZNF311Q5JNZ3 666 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 RPS26P11Q5JNZ5 115 aaPredicted RBP11.95□□□□□ -0.5
HMGB2-205ENST00000511316 RPL13AP3Q6NVV1 102 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 TRAPPC5Q8IUR0 188 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 GPALPP1Q8IXQ4 340 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 ZNF485Q8NCK3 441 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 DHRS9Q9BPW9 319 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 ACTR6Q9GZN1 396 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 SAP130Q9H0E3 1048 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 KLK13Q9UKR3 277 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 NUP50Q9UKX7 468 aa11.95□□□□□ -0.5
HMGB2-205ENST00000511316 LINC00854A0A1B0GVQ3 168 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 ANKRD61A6NGH8 418 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 A8MV72 311 aaPredicted RBP11.94□□□□□ -0.5
HMGB2-205ENST00000511316 WWP2O00308 870 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 SAP18O00422 153 aaKnown RBP11.94□□□□□ -0.5
HMGB2-205ENST00000511316 SHOXO15266 292 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 CLEC3AO75596 197 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 GBAP04062 536 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 LIMS3P0CW19 117 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 LIMS4P0CW20 117 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 PDHA2P29803 388 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 SLC6A1P30531 599 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 TSFMP43897 325 aaKnown RBP11.94□□□□□ -0.5
HMGB2-205ENST00000511316 RFX3P48380 749 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 INSM1Q01101 510 aaPredicted RBP11.94□□□□□ -0.5
HMGB2-205ENST00000511316 FABP5Q01469 135 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 FOXC1Q12948 553 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 HSPB3Q12988 150 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 DECR1Q16698 335 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 COL28A1Q2UY09 1125 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 KLHL12Q53G59 568 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 CDCP2Q5VXM1 449 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 PYHIN1Q6K0P9 492 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 PAMR1Q6UXH9 720 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 IDO2Q6ZQW0 420 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 TAF8Q7Z7C8 310 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 TRIM48Q8IWZ4 208 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 OR5M3Q8NGP4 307 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 PATE1Q8WXA2 126 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 RFT1Q96AA3 541 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 OR2M2Q96R28 347 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 OR51I1Q9H343 314 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 CYSLTR2Q9NS75 346 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 MOSPD1Q9UJG1 213 aa11.94□□□□□ -0.5
HMGB2-205ENST00000511316 A0A0B4J293 547 aa11.93□□□□□ -0.5
HMGB2-205ENST00000511316 C7orf66A4D0T2 115 aa11.93□□□□□ -0.5
HMGB2-205ENST00000511316 TUBAL3A6NHL2 446 aa11.93□□□□□ -0.5
HMGB2-205ENST00000511316 GABRPO00591 440 aa11.93□□□□□ -0.5
HMGB2-205ENST00000511316 NDUFS4O43181 175 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms