RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 TXNDC9O14530 226 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 TFECO14948 347 aaPredicted RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 ITM2AO43736 263 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 KCNJ13O60928 360 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 NDUFS7O75251 213 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 OR2B3O76000 313 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 C1QAP02745 245 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 SERPINE1P05121 402 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 RBMY1DP0C7P1 496 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 FAM58BPP0C7Q3 252 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ETS1P14921 441 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ETS2P15036 469 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 LHCGRP22888 699 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 LOXP28300 417 aaPredicted RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 DCTDP32321 178 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 SERPINB6P35237 376 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ELK3P41970 407 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 PTPN9P43378 593 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 GABRB2P47870 512 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 RPL34P49207 117 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 PSMD7P51665 324 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 MTTPP55157 894 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ADARP55265 1226 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 VSX2P58304 361 aaPredicted RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 YWHAEP62258 255 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 SLC25A11Q02978 314 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 DLG1Q12959 904 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 RPE65Q16518 533 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 TIGD6Q17RP2 521 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 GRAMD1BQ3KR37 738 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 KBTBD12Q3ZCT8 623 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ANKRD22Q5VYY1 191 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 METTL21CQ5VZV1 264 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 KLHL35Q6PF15 583 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 DCUN1D2Q6PH85 259 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 LCLAT1Q6UWP7 414 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 CYS1Q717R9 158 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 H1FNTQ75WM6 255 aaPredicted RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 ERI1Q8IV48 349 aaKnown RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 MAP7D3Q8IWC1 876 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 FBXW8Q8N3Y1 598 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
GYPB-212ENST00000511198 SETD9Q8NE22 299 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ACTL9Q8TC94 416 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 SLC26A7Q8TE54 656 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 PIK3IP1Q96FE7 263 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 MCEEQ96PE7 176 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 DEFB127Q9H1M4 99 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 MVB12BQ9H7P6 319 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 FAM60AQ9NP50 221 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 MRGBPQ9NV56 204 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 BLOC1S6Q9UL45 172 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 CHMP2BQ9UQN3 213 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 POMPQ9Y244 141 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 SH3GLB1Q9Y371 365 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 AP1M2Q9Y6Q5 423 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 HECTD4Q9Y4D8 3996 aa4.79□□□□□ -1.64
GYPB-212ENST00000511198 ARHGAP21Q5T5U3 1957 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 IGHV1-45A0A0A0MS14 117 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GOLGA8QA0A0J9YX86 632 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 A0A1W2PQ72 361 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 FAM170AA1A519 330 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 HYKKA2RU49 373 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GOLGA8OA6NCC3 632 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 OR6C74A6NCV1 312 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 FAM159BA6NKW6 160 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GABRR3A8MPY1 467 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 ZNF487B1APH4 448 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GOLGA8NF8WBI6 632 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 SLCO1B7G3V0H7 640 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GOLGA8MH3BSY2 632 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 CASKO14936 926 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 KDELR3O43731 214 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 KIAA0513O60268 411 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 NME2P1O60361 137 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 CST8O60676 142 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 BANF1O75531 89 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 ZNF189O75820 626 aaPredicted RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 CALCAP01258 141 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 TFAP2AP05549 437 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 ZNF23P17027 643 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 TPSB2P20231 275 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 CDH3P22223 829 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 KDELR1P24390 212 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 PSMA2P25787 234 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GGT5P36269 586 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 RGRP47804 291 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 GABRA4P48169 554 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 CDK9P50750 372 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 YWHAZP63104 245 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 TUBA1BP68363 451 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 PHEXP78562 749 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 BASP1P80723 227 aaKnown RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 LOXL1Q08397 574 aaPredicted RBP4.78□□□□□ -1.64
GYPB-212ENST00000511198 NME3Q13232 169 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 DPYSQ14117 519 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 TFDP2Q14188 446 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 DPYSL3Q14195 570 aa4.78□□□□□ -1.64
GYPB-212ENST00000511198 HERC3Q15034 1050 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms