RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 DPM1O60762 260 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 LDB3O75112 727 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 LGI1O95970 557 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 MAS1P04201 325 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 LIMS3P0CW19 117 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 LIMS4P0CW20 117 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 AHCYP23526 432 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 CRMP1Q14194 572 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ATF6BQ99941 703 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 NXF2Q9GZY0 626 aaKnown RBP13.9□□□□□ -0.18
USP38-202ENST00000510377 MTHFD2LQ9H903 347 aaPredicted RBP13.9□□□□□ -0.18
USP38-202ENST00000510377 MYO16Q9Y6X6 1858 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 TRIM3O75382 744 aaPredicted RBP13.9□□□□□ -0.18
USP38-202ENST00000510377 NUP62P37198 522 aaPredicted RBP13.9□□□□□ -0.18
USP38-202ENST00000510377 MVDP53602 400 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 PCBP3P57721 371 aaKnown RBP13.9□□□□□ -0.18
USP38-202ENST00000510377 ALKAL2Q6UX46 152 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 CAMKMTQ7Z624 323 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ANKRD53Q8N9V6 530 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 CHST4Q8NCG5 386 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ABHD4Q8TB40 342 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 BPIFA2Q96DR5 249 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 ARHGAP9Q9BRR9 750 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 SGPP1Q9BX95 441 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 EXO5Q9H790 373 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 EVA1BQ9NVM1 165 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 SLC23A2Q9UGH3 650 aa13.9□□□□□ -0.18
USP38-202ENST00000510377 MYOFQ9NZM1 2061 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 CDHR4A6H8M9 788 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 GRK6P43250 576 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 POU6F2P78424 691 aaPredicted RBP13.89□□□□□ -0.19
USP38-202ENST00000510377 YIF1BQ5BJH7 314 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 KANSL1Q7Z3B3 1105 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 GDF7Q7Z4P5 450 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 TMEM150AQ86TG1 271 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 ADIPOR2Q86V24 386 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 MS4A15Q8N5U1 240 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 RWDD3Q9Y3V2 267 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 CACNA1IQ9P0X4 2223 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 KRT33AO76009 404 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 TIMP1P01033 207 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 SEMG1P04279 462 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 CLDN20P56880 219 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 DGLUCYQ7Z3D6 616 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 GOT1L1Q8NHS2 421 aaPredicted RBP13.89□□□□□ -0.19
USP38-202ENST00000510377 WDFY2Q96P53 400 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 VN1R3Q9BXE9 311 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 CD93Q9NPY3 652 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 B3GAT2Q9NPZ5 323 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 PLXNB2O15031 1838 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 B4GALT2O60909 372 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 ZNF888P0CJ79 500 aaPredicted RBP13.89□□□□□ -0.19
USP38-202ENST00000510377 ENDOUP21128 410 aaKnown RBP13.89□□□□□ -0.19
USP38-202ENST00000510377 TEAD1P28347 426 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 VEGFCP49767 419 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 GALEQ14376 348 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 GXYLT1Q4G148 440 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 FAM209AQ5JX71 171 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 SIGIRRQ6IA17 410 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 ZNF559Q9BR84 538 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 C1QTNF2Q9BXJ5 285 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 SLC25A19Q9HC21 320 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 FBXL3Q9UKT7 428 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 ACSL5Q9ULC5 683 aa13.89□□□□□ -0.19
USP38-202ENST00000510377 CREBL2O60519 120 aaPredicted RBP13.88□□□□□ -0.19
USP38-202ENST00000510377 AGR2O95994 175 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 BSGP35613 385 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 PRDX1Q06830 199 aaKnown RBP13.88□□□□□ -0.19
USP38-202ENST00000510377 EXOSC7Q15024 291 aaKnown RBP13.88□□□□□ -0.19
USP38-202ENST00000510377 TMEM35AQ53FP2 167 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 TOR2AQ5JU69 321 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 ADGRF3Q8IZF5 1079 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 ARL14Q8N4G2 192 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 ZNF680Q8NEM1 530 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 OR5M3Q8NGP4 307 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 MOAP1Q96BY2 351 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 INSM2Q96T92 566 aaPredicted RBP13.88□□□□□ -0.19
USP38-202ENST00000510377 SEC22CQ9BRL7 303 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 LGR4Q9BXB1 951 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 RAB11FIP5Q9BXF6 653 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 ACOXLQ9NUZ1 547 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 SIDT1Q9NXL6 827 aaKnown RBP13.88□□□□□ -0.19
USP38-202ENST00000510377 FLVCR2Q9UPI3 526 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 IER3IP1Q9Y5U9 82 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 A8MVJ9 347 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 SCO2O43819 266 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 SOD1P00441 154 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 LALBAP00709 142 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 MSL3P1P0C860 447 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 HTR1FP30939 366 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 GDNFP39905 211 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 ARL4DP49703 201 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 PRSS58Q8IYP2 241 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 MOSPD2Q8NHP6 518 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 PFN4Q8NHR9 129 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 LGALS14Q8TCE9 139 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 NR4A3Q92570 626 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 PMEPA1Q969W9 287 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 DDOQ99489 341 aa13.88□□□□□ -0.19
USP38-202ENST00000510377 GPA33Q99795 319 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms