RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 NUDT17P0C025 328 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 PRPS1L1P21108 318 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 SHC1P29353 583 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 XKR7Q5GH72 579 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 BHLHB9Q6PI77 547 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 CBLN3Q6UW01 205 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 TMCO5AQ8N6Q1 288 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 OR5AK3PQ8NH89 298 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 SFXN5Q8TD22 340 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 CPNE4Q96A23 557 aaPredicted RBP13.74□□□□□ -0.21
TPM3-219ENST00000509409 MOAP1Q96BY2 351 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 COQ8BQ96D53 544 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 PLPPR2Q96GM1 343 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 BDH2Q9BUT1 245 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 DUSP26Q9BV47 211 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 BHLHE41Q9C0J9 482 aaPredicted RBP13.74□□□□□ -0.21
TPM3-219ENST00000509409 L2HGDHQ9H9P8 463 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 LGALS13Q9UHV8 139 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 DTNAQ9Y4J8 743 aa13.74□□□□□ -0.21
TPM3-219ENST00000509409 GPC6Q9Y625 555 aaPredicted RBP13.74□□□□□ -0.21
TPM3-219ENST00000509409 H7C1Q1 480 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 EFNA2O43921 213 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 PRKD3O94806 890 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 BPGMP07738 259 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 MATN1P21941 496 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 LOXP28300 417 aaPredicted RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 ELK4P28324 431 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 ADH6P28332 368 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 AGTR1P30556 359 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 CCR4P51679 360 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 NR1H2P55055 460 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 VSNL1P62760 191 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 MAD2L1Q13257 205 aaPredicted RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 RNPS1Q15287 305 aaKnown RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 TOMM34Q15785 309 aaPredicted RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 ZNF239Q16600 458 aaKnown RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 PRSS57Q6UWY2 283 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 ZNF704Q6ZNC4 412 aaPredicted RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 FCRLAQ7L513 359 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 NUDCD3Q8IVD9 361 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 TUSC5Q8IXB3 177 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 PSMA8Q8TAA3 256 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 GPR119Q8TDV5 335 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 TMEM171Q8WVE6 324 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 ARL8AQ96BM9 186 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 OR7D2Q96RA2 312 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 HDHD5Q9BXW7 423 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 SRXN1Q9BYN0 137 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 GPATCH2Q9NW75 528 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 NAV3Q8IVL0 2385 aa13.73□□□□□ -0.21
TPM3-219ENST00000509409 FLNAP21333 2647 aaKnown RBP13.73□□□□□ -0.21
TPM3-219ENST00000509409 WDR91A4D1P6 747 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 CYP7B1O75881 506 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 NTN1O95631 604 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 PLAUP00749 431 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 G6PDP11413 515 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 CREB1P16220 341 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 IL32P24001 234 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 SLC7A1P30825 629 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 ARRB2P32121 409 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 SUMO3P55854 103 aaPredicted RBP13.72□□□□□ -0.21
TPM3-219ENST00000509409 GPR68Q15743 365 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 NDUFAF6Q330K2 333 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.72□□□□□ -0.21
TPM3-219ENST00000509409 NUFIP2Q7Z417 695 aaKnown RBP13.72□□□□□ -0.21
TPM3-219ENST00000509409 C6orf120Q7Z4R8 191 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 TOR1AIP2Q8NFQ8 470 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 STEAP2Q8NFT2 490 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 OR5D16Q8NGK9 328 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 ABHD3Q8WU67 409 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 PPP1R36Q96LQ0 422 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 SDF2Q99470 211 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 ICAM5Q9UMF0 924 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 PCDHGB4Q9UN71 923 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 ACTL7BQ9Y614 415 aa13.72□□□□□ -0.21
TPM3-219ENST00000509409 DUXAA6NLW8 204 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 ZNF264O43296 627 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 EIF4E2O60573 245 aaKnown RBP13.71□□□□□ -0.21
TPM3-219ENST00000509409 LY6G6DO95868 133 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 HEXAP06865 529 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 YES1P07947 543 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 UBL4AP11441 157 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 PRKCAP17252 672 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.21
TPM3-219ENST00000509409 PTH2RP49190 550 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 CLDN8P56748 225 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 HBA1P69905 142 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 EMX2Q04743 252 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 CBFBQ13951 182 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 CAPRIN1Q14444 709 aaKnown RBP13.71□□□□□ -0.21
TPM3-219ENST00000509409 TSC22D1Q15714 1073 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 PDZK1Q5T2W1 519 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 RIMKLAQ8IXN7 391 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 CIARTQ8N365 385 aaPredicted RBP13.71□□□□□ -0.21
TPM3-219ENST00000509409 OR5W2Q8NH69 310 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 RNF128Q8TEB7 428 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 ZFP90Q8TF47 636 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 MRGPRX4Q96LA9 322 aa13.71□□□□□ -0.21
TPM3-219ENST00000509409 OR10A4Q9H209 315 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms