RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PLBD1Q6P4A8 553 aa13.72□□□□□ -0.21
PHF3-209ENST00000509330 C16orf87Q6PH81 154 aa13.72□□□□□ -0.21
PHF3-209ENST00000509330 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
PHF3-209ENST00000509330 CYB561A3Q8NBI2 242 aa13.72□□□□□ -0.21
PHF3-209ENST00000509330 THAP3Q8WTV1 239 aaPredicted RBP13.72□□□□□ -0.21
PHF3-209ENST00000509330 ATOH1Q92858 354 aaPredicted RBP13.72□□□□□ -0.21
PHF3-209ENST00000509330 CD180Q99467 661 aa13.72□□□□□ -0.21
PHF3-209ENST00000509330 POLR2J2Q9GZM3 115 aaKnown RBP13.72□□□□□ -0.21
PHF3-209ENST00000509330 SERTAD3Q9UJW9 196 aa13.72□□□□□ -0.21
PHF3-209ENST00000509330 FER1L5A0AVI2 2057 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 SMIM30A4D0T7 59 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 OIP5O43482 229 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 RPLP0P05388 317 aaKnown RBP13.71□□□□□ -0.21
PHF3-209ENST00000509330 ACAA2P42765 397 aaKnown RBP13.71□□□□□ -0.21
PHF3-209ENST00000509330 SERPINB10P48595 397 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 TMED1Q13445 227 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CD226Q15762 336 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 KLHL12Q53G59 568 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CBLN3Q6UW01 205 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CPOQ8IVL8 374 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 D2HGDHQ8N465 521 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 SLC38A9Q8NBW4 561 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 OR2T33Q8NG76 320 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 PHOSPHO1Q8TCT1 267 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 SLC2A12Q8TD20 617 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 OPALINQ96PE5 141 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 IFT27Q9BW83 186 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CDCA4Q9BXL8 241 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 C6orf62Q9GZU0 229 aaPredicted RBP13.71□□□□□ -0.21
PHF3-209ENST00000509330 UBQLN3Q9H347 655 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 GAREM1Q9H706 876 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 TOR4AQ9NXH8 423 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 TESQ9UGI8 421 aaKnown RBP13.71□□□□□ -0.21
PHF3-209ENST00000509330 GMEB2Q9UKD1 530 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 YARS2Q9Y2Z4 477 aaKnown RBP13.71□□□□□ -0.21
PHF3-209ENST00000509330 MED31Q9Y3C7 131 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 MRPS14O60783 128 aaKnown RBP13.71□□□□□ -0.21
PHF3-209ENST00000509330 LYPD3O95274 346 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 DRD5P21918 477 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CSTF2P33240 577 aaKnown RBP eCLIP13.71□□□□□ -0.21
PHF3-209ENST00000509330 STAT5AP42229 794 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CCL7P80098 99 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 LRRC17Q8N6Y2 441 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 OSTF1Q92882 214 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 ART5Q96L15 291 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 OR6C1Q96RD1 312 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CTRCQ99895 268 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 HCAR1Q9BXC0 346 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 IL20Q9NYY1 176 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 RPS6KB2Q9UBS0 482 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 CDH10Q9Y6N8 788 aa13.71□□□□□ -0.21
PHF3-209ENST00000509330 A0A1W2PQM1 296 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 SURF4O15260 269 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 KLF4O43474 513 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 GYPBP06028 91 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 IDUAP35475 653 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 MTNR1AP48039 350 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 SLC37A1P57057 533 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 TEKQ02763 1124 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 SPHARQ15513 63 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 TMEM201Q5SNT2 666 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 PMS2CLQ68D20 193 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 ZNF367Q7RTV3 350 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 DYNC2LI1Q8TCX1 351 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 ZNF501Q96CX3 271 aaPredicted RBP13.71□□□□□ -0.22
PHF3-209ENST00000509330 TTTY10Q9BZA0 68 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 ANKRD19PQ9H560 264 aa13.71□□□□□ -0.22
PHF3-209ENST00000509330 HINT3Q9NQE9 182 aaKnown RBP13.71□□□□□ -0.22
PHF3-209ENST00000509330 ADAMTS9Q9P2N4 1935 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 KHNYNO15037 678 aaKnown RBP13.7□□□□□ -0.22
PHF3-209ENST00000509330 LAMTOR5O43504 91 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 CLUP10909 449 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 BMP7P18075 431 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 ATP12AP54707 1039 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 GPLD1P80108 840 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 OCLNQ16625 522 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 APOOLQ6UXV4 268 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 OR5M3Q8NGP4 307 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 NUDT9Q9BW91 350 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 GTPBP2Q9BX10 602 aaKnown RBP13.7□□□□□ -0.22
PHF3-209ENST00000509330 RAB33BQ9H082 229 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 OR51V1Q9H2C8 321 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 ZNF223Q9UK11 482 aaPredicted RBP13.7□□□□□ -0.22
PHF3-209ENST00000509330 FBXL4Q9UKA2 621 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 A0A0B4J2E0 115 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 A0A1B0GX12 115 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 PRODHO43272 600 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 TECTAO75443 2155 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 REM1O75628 298 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 MRPL3P09001 348 aaKnown RBP13.7□□□□□ -0.22
PHF3-209ENST00000509330 NR0B1P51843 470 aaKnown RBP13.7□□□□□ -0.22
PHF3-209ENST00000509330 RPS7P62081 194 aaKnown RBP13.7□□□□□ -0.22
PHF3-209ENST00000509330 SERTAD2Q14140 314 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 DGUOKQ16854 277 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 BMP8AQ7Z5Y6 402 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 OR51G2Q8NGK0 314 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 NR4A3Q92570 626 aa13.7□□□□□ -0.22
PHF3-209ENST00000509330 TRMT61AQ96FX7 289 aaKnown RBP13.7□□□□□ -0.22
PHF3-209ENST00000509330 SLC41A2Q96JW4 573 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms