RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 C1orf162Q8NEQ5 155 aaPredicted RBP3.35□□□□□ -1.87
RNF4-211ENST00000509206 OR2M3Q8NG83 312 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 OR4K14Q8NGD5 310 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 CLDND2Q8NHS1 167 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 FBXO30Q8TB52 745 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 DUSP19Q8WTR2 217 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 TAF15Q92804 592 aaKnown RBP eCLIP3.35□□□□□ -1.87
RNF4-211ENST00000509206 UBE2E3Q969T4 207 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 RGMAQ96B86 450 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 C1GALT1C1Q96EU7 318 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 CITED1Q99966 193 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 RSPO3Q9BXY4 272 aaPredicted RBP3.35□□□□□ -1.87
RNF4-211ENST00000509206 ITPAQ9BY32 194 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 MS4A7Q9GZW8 240 aaPredicted RBP3.35□□□□□ -1.87
RNF4-211ENST00000509206 ZMAT4Q9H898 229 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 TREX1Q9NSU2 369 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 NECAP2Q9NVZ3 263 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 ANO10Q9NW15 660 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 TAS2R13Q9NYV9 303 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 KLHL13Q9P2N7 655 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 ASH2LQ9UBL3 628 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 ASIC3Q9UHC3 531 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 PRSS50Q9UI38 385 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 GPR160Q9UJ42 338 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 VDAC3Q9Y277 283 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 OR10H1Q9Y4A9 318 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 PCDHGB5Q9Y5G0 923 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 TENM3Q9P273 2699 aa3.35□□□□□ -1.87
RNF4-211ENST00000509206 CMYA5Q8N3K9 4069 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA8QA0A0J9YX86 632 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CLPSL1A2RUU4 121 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA8OA6NCC3 632 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GJE1A6NN92 205 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 WASHC1A8K0Z3 465 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ZNF814B7Z6K7 855 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 C9JVG2 144 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA8NF8WBI6 632 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 C3orf84H3BNL1 204 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GOLGA8RI6L899 631 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 DHHO43323 396 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 FRS3O43559 492 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PLPP2O43688 288 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ERLIN1O75477 346 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SEC14L2O76054 403 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PGM3O95394 542 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 TSPAN15O95858 294 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 MPIG6BO95866 241 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GPANK1O95872 356 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CRYAAP02489 173 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 HPXP02790 462 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 DBHP09172 617 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CT62P0C5K7 136 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PORP16435 677 aaPredicted RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 CD22P20273 847 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 IGHV1-2P23083 117 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GATA3P23771 443 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SDHAP31040 664 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 EVI2BP34910 448 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SFTPDP35247 375 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GDNFP39905 211 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PPICP45877 212 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 OR3A2P47893 321 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 MTNR1AP48039 350 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PPOXP50336 477 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PNLIPRP2P54317 469 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 RAG2P55895 527 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 RWDD2BP57060 319 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SCAND1P57086 179 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 TMEM33P57088 247 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PSPHP78330 225 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SARNPP82979 210 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 IRF8Q02556 426 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CD69Q07108 199 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 RIN1Q13671 783 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 DDX39BQ13838 428 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 DHX34Q14147 1143 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 EXOSC7Q15024 291 aaKnown RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 PDCD1Q15116 288 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SLC9A3R2Q15599 337 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ASTE1Q2TB18 679 aaPredicted RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 MST1LQ2TV78 715 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 NRN1LQ496H8 165 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ZNF628Q5EBL2 1059 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CPTPQ5TA50 214 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 NXNQ6DKJ4 435 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 OR52E8Q6IFG1 317 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 PAQR3Q6TCH7 311 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 RHOUQ7L0Q8 258 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SPATA21Q7Z572 469 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 GALNT5Q7Z7M9 940 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 DENND6AQ8IWF6 608 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 LILRA2Q8N149 483 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 SLC43A2Q8N370 569 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ZNF433Q8N7K0 673 aaPredicted RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 OR52R1Q8NGF1 315 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CALML6Q8TD86 181 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 ABHD3Q8WU67 409 aa3.34□□□□□ -1.87
RNF4-211ENST00000509206 CPNE4Q96A23 557 aaPredicted RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 EFHD2Q96C19 240 aaPredicted RBP3.34□□□□□ -1.87
RNF4-211ENST00000509206 LRRC58Q96CX6 371 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms