RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ARHGAP11AQ6P4F7 1023 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ZCCHC12Q6PEW1 402 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 DLEU7Q6UYE1 221 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 RPTNQ6XPR3 784 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 MSANTD1Q6ZTZ1 278 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CCDC71Q8IV32 467 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 C9orf106Q8NAJ2 232 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ACBD4Q8NC06 268 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 C1GALT1C1Q96EU7 318 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 SH3YL1Q96HL8 342 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ADGRG7Q96K78 797 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 DOCK7Q96N67 2140 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 OR52E6Q96RD3 313 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 TIMP4Q99727 224 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 TUBA1CQ9BQE3 449 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 C3orf14Q9HBI5 128 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 QPCTLQ9NXS2 382 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 VAPAQ9P0L0 249 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 CLCF1Q9UBD9 225 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ADAM30Q9UKF2 790 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ICAM5Q9UMF0 924 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 USP22Q9UPT9 525 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 RPH3AQ9Y2J0 694 aaPredicted RBP6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 APCP25054 2843 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 ABCA12Q86UK0 2595 aa6.51□□□□□ -1.37
TOPBP1-207ENST00000509162 C15orf38-AP3S2A0A0A6YYH1 394 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 A0A0G2JND7 137 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 A0A0G2JNJ9 132 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 A0A1W2PQD3 144 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 OR2M5A3KFT3 312 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 TTC36A6NLP5 189 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 CAPN14A8MX76 684 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ETV2O00321 342 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 RFXANKO14593 260 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 AP3D1O14617 1153 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 HCRTR2O43614 444 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 SUSD5O60279 629 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 LINGO3P0C6S8 592 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ZCCHC18P0CG32 403 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 GLI4P10075 376 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF708P17019 499 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 DRD4P21917 467 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 MATN1P21941 496 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ELAVL4P26378 380 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 MDH1P40925 334 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 KHKP50053 298 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 SEC24CP53992 1094 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 POU4F3Q15319 338 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ZNF141Q15928 474 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ARHGAP11BQ3KRB8 267 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 VPS26BQ4G0F5 336 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 GXYLT1Q4G148 440 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 C1orf185Q5T7R7 199 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ANXA8L1Q5VT79 327 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 AP1ARQ63HQ0 302 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ACAD11Q709F0 780 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 NLRC3Q7RTR2 1065 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 GLB1L3Q8NCI6 653 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 OR1J4Q8NGS1 313 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ADAMTS15Q8TE58 950 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 DUSP19Q8WTR2 217 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 PHF10Q8WUB8 498 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 MAL2Q969L2 176 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 MOAP1Q96BY2 351 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ROPN1LQ96C74 230 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 TMCO6Q96DC7 493 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 SPDL1Q96EA4 605 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 PANX1Q96RD7 426 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 WFDC6Q9BQY6 131 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 SLC39A3Q9BRY0 314 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 SPATA9Q9BWV2 254 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 NMUR2Q9GZQ4 415 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 COQ10BQ9H8M1 238 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 MED4Q9NPJ6 270 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 SAR1AQ9NR31 198 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 MED17Q9NVC6 651 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 FAM53CQ9NYF3 392 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 CCDC167Q9P0B6 97 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 PPP4R1LQ9P1A2 415 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 PLEKHB1Q9UF11 243 aaPredicted RBP6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 Q9UFV3 132 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 PFDN2Q9UHV9 154 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 MKLN1Q9UL63 735 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 RNF6Q9Y252 685 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 TACC2O95359 2948 aa6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 ANK3Q12955 4377 aaKnown RBP6.5□□□□□ -1.37
TOPBP1-207ENST00000509162 PDZD2O15018 2839 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 A0A096LPI6 279 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 C7orf72A4D263 438 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 OR14I1A6ND48 311 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 E9PLN8 166 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 ATP8B1O43520 1251 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 GCM2O75603 506 aaPredicted RBP6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 TRAPPC6AO75865 159 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 KCNH1O95259 989 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 H6PDO95479 791 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 IL6P05231 212 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 PRF1P14222 555 aa6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 DDX5P17844 614 aaKnown RBP6.49□□□□□ -1.37
TOPBP1-207ENST00000509162 ACVR2AP27037 513 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms