RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 BMP4P12644 408 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 TSPAN8P19075 237 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 GGT1P19440 569 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 PTAFRP25105 342 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 NTSP30990 170 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 LCN1P31025 176 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 HSD17B3P37058 310 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 MAGEA12P43365 314 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 CLCQ05315 142 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF763Q0D2J5 394 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 RASA2Q15283 850 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 VPS26BQ4G0F5 336 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 ARL13AQ5H913 290 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 BEND6Q5SZJ8 279 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 FAM219BQ5XKK7 198 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF544Q6NX49 715 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 EMBQ6PCB8 327 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 SLC22A25Q6T423 547 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 MTERF4Q7Z6M4 381 aaKnown RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 PIAS4Q8N2W9 510 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 EIF1ADQ8N9N8 165 aaKnown RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 SGMS2Q8NHU3 365 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 FAM110BQ8TC76 370 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 AENQ8WTP8 325 aaKnown RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 IFT81Q8WYA0 676 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 PIK3R3Q92569 461 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 HTRA1Q92743 480 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 MSI2Q96DH6 328 aaKnown RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 ZMYND19Q96E35 227 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 APIPQ96GX9 242 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 C1orf159Q96HA4 380 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 AMDHD1Q96NU7 426 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 PSD2Q9BQI7 771 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 PRR14Q9BWN1 585 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 COQ10BQ9H8M1 238 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 ZNF446Q9NWS9 450 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 KLHL9Q9P2J3 617 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 PRSS50Q9UI38 385 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 ING1Q9UK53 422 aaPredicted RBP8.28□□□□□ -1.08
NEDD9-211ENST00000508546 POU2F3Q9UKI9 436 aa8.28□□□□□ -1.08
NEDD9-211ENST00000508546 WNK1Q9H4A3 2382 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 SERTM1A2A2V5 107 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 A8MT66 165 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 TCF21O43680 179 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 EFNA2O43921 213 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 ANXA4P09525 319 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 COL6A2P12110 1019 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 IGHV1-2P23083 117 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 CD40P25942 277 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 FABP6P51161 128 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 PLTPP55058 493 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 RAC3P60763 192 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 CAV1Q03135 178 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 C2orf80Q0P641 193 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 FOXF1Q12946 379 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 FAM71E1Q6IPT2 247 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 KLHL17Q6TDP4 642 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 B3GLCTQ6Y288 498 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 DEPDC4Q8N2C3 294 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF433Q8N7K0 673 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 GATSQ8NAP1 163 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 OR6Y1Q8NGX8 325 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 OR2W6PQ8NHA6 318 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 B4GALNT2Q8NHY0 566 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 FBXO25Q8TCJ0 367 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 GPR151Q8TDV0 419 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 ZFP90Q8TF47 636 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 MRRFQ96E11 262 aaKnown RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 SH3YL1Q96HL8 342 aaPredicted RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF382Q96SR6 550 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 KLHDC3Q9BQ90 382 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 MRPL57Q9BQC6 102 aaKnown RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 EBPLQ9BY08 206 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 MRPL46Q9H2W6 279 aaKnown RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 CXorf36Q9H7Y0 433 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 EML4Q9HC35 981 aaKnown RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 MIEF1Q9NQG6 463 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 UBQLN4Q9NRR5 601 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 WBP11Q9Y2W2 641 aaKnown RBP8.27□□□□□ -1.09
NEDD9-211ENST00000508546 PMF1-BGLAPU3KQ54 211 aa8.27□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF724A8MTY0 619 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 ZNF195O14628 629 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 KIAA0513O60268 411 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 CYTIPO60759 359 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 KCNK2O95069 426 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 SBK3P0C264 359 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 PRPS2P11908 318 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 APEHP13798 732 aaKnown RBP8.26□□□□□ -1.09
NEDD9-211ENST00000508546 HPGDP15428 266 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 ENPP1P22413 925 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 EDNRAP25101 427 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 ECHS1P30084 290 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 HMOX2P30519 316 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 NR4A2P43354 598 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 PRIM2P49643 509 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 HTR6P50406 440 aa8.26□□□□□ -1.09
NEDD9-211ENST00000508546 PDLIM4P50479 330 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms