RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TINAGQ9UJW2 476 aa4.15□□□□□ -1.75
NUP54-206ENST00000508465 UTS2RQ9UKP6 389 aa4.15□□□□□ -1.75
NUP54-206ENST00000508465 PSME2Q9UL46 239 aa4.15□□□□□ -1.75
NUP54-206ENST00000508465 EXO1Q9UQ84 846 aaKnown RBP4.15□□□□□ -1.75
NUP54-206ENST00000508465 DTX4Q9Y2E6 619 aa4.15□□□□□ -1.75
NUP54-206ENST00000508465 PCDHGB6Q9Y5F9 930 aa4.15□□□□□ -1.75
NUP54-206ENST00000508465 ZNF780BQ9Y6R6 833 aa4.15□□□□□ -1.75
NUP54-206ENST00000508465 CPAMD8Q8IZJ3 1885 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 A0A1B0GTH9 108 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ATP6AP2A0A1C7CYW4 349 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ASPDHA6ND91 283 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 KLRC4-KLRK1H3BQV0 150 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 TFECO14948 347 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 AZIN1O14977 448 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 RGS16O15492 202 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 ITM2AO43736 263 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 SLC19A2O60779 497 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 GUCY1B2O75343 617 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ATP6AP2O75787 350 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 P04436 131 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 STSP08842 583 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 IL6RP08887 468 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 NUDT17P0C025 328 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 RFPL3SP0C7P2 107 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 UROSP10746 265 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ZNF24P17028 368 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ARRB2P32121 409 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 TRPC1P48995 793 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ARFIP1P53367 373 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 FUT7Q11130 342 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 CSTF3Q12996 717 aaKnown RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 BIKQ13323 160 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 MPEG1Q2M385 716 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 PRICKLE4Q2TBC4 344 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 UGT3A2Q3SY77 523 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 KRTCAP3Q53RY4 240 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 CMPK2Q5EBM0 449 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 PRAMEF20Q5VT98 475 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 SLC22A10Q63ZE4 541 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 NOXRED1Q6NXP6 359 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 EMBQ6PCB8 327 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 OPN5Q6U736 354 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 RTL4Q6ZR62 310 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 FAM47EQ6ZV65 393 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 EXOC3L1Q86VI1 746 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 DOLPP1Q86YN1 238 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 NUDCD3Q8IVD9 361 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 CHERPQ8IWX8 916 aaKnown RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 DDIASQ8IXT1 998 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 GBP7Q8N8V2 638 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 FAM156AQ8NDB6 213 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 OR52R1Q8NGF1 315 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 OR9A2Q8NGT5 310 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 OR2T11Q8NH01 316 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 OR8K3Q8NH51 312 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 CLHC1Q8NHS4 586 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 RP9Q8TA86 221 aaKnown RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 RDH11Q8TC12 318 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ADIPOR1Q96A54 375 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 APOPT1Q96IL0 206 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 PKNOX2Q96KN3 472 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 LYZL4Q96KX0 146 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 PPP1R36Q96LQ0 422 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 C3orf30Q96M34 536 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 JSRP1Q96MG2 331 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 GPR137Q96N19 417 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ZIM3Q96PE6 472 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 BBS4Q96RK4 519 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 SMC6Q96SB8 1091 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 PAIP2Q9BPZ3 127 aaKnown RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 FAM173AQ9BQD7 235 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 TMEM109Q9BVC6 243 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ROPN1BQ9BZX4 212 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 NXF5Q9H1B4 397 aaKnown RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 ROPN1Q9HAT0 212 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 PROK2Q9HC23 129 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 SERHLQ9NQF3 203 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 SLC35C2Q9NQQ7 365 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ALKBH4Q9NXW9 302 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 MAT2BQ9NZL9 334 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ZDHHC2Q9UIJ5 367 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 ZNF835Q9Y2P0 537 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 KLF13Q9Y2Y9 288 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 CCL27Q9Y4X3 112 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 POLR3HQ9Y535 204 aaPredicted RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.14□□□□□ -1.75
NUP54-206ENST00000508465 EML6Q6ZMW3 1958 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 LRBAP50851 2863 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 CROCCQ5TZA2 2017 aa4.14□□□□□ -1.75
NUP54-206ENST00000508465 HIVEP3Q5T1R4 2406 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 DIDO1Q9BTC0 2240 aaKnown RBP4.13□□□□□ -1.75
NUP54-206ENST00000508465 TEX15Q9BXT5 2789 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 POLEQ07864 2286 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 ICE1Q9Y2F5 2266 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 A0A1B0GUH1 482 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 C1orf226A1L170 272 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 GOLGA6L10A6NI86 522 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 OR6C76A6NM76 312 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 C17orf51A8MQB3 221 aa4.13□□□□□ -1.75
NUP54-206ENST00000508465 NPIPA2E9PIF3 369 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms