RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 SLC9B1Q4ZJI4 515 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 UNC50Q53HI1 259 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 SMUG1Q53HV7 270 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 NKAPLQ5M9Q1 402 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF678Q5SXM1 525 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 C6orf183Q5T699 404 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZCCHC23Q6ZST2 131 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 C8orf59Q8N0T1 100 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CLEC4FQ8N1N0 589 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 FAM109AQ8N4B1 249 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF781Q8N8C0 355 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF441Q8N8Z8 693 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 C17orf47Q8NEP4 570 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 OR6Q1Q8NGQ2 317 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 RHOXF1Q8NHV9 184 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CHTF18Q8WVB6 975 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 SELENOMQ8WWX9 145 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 MUL1Q969V5 352 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 SPACA9Q96E40 222 aaPredicted RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 NSUN5Q96P11 429 aaKnown RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF382Q96SR6 550 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 SECISBP2Q96T21 854 aaKnown RBP7.36□□□□□ -1.23
SCN1A-207ENST00000507401 AIFM2Q9BRQ8 373 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CNPPD1Q9BV87 410 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 TTTY12Q9BZ98 90 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 WWTR1Q9GZV5 400 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 DEFB127Q9H1M4 99 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ARMC7Q9H6L4 198 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 NEK6Q9HC98 313 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 COQ3Q9NZJ6 369 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 VPS29Q9UBQ0 182 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF229Q9UJW7 825 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF225Q9UK10 706 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF221Q9UK13 617 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CES1P1Q9UKY3 287 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PCDHGB4Q9UN71 923 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 ERVK-19Q9WJR5 959 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CFL2Q9Y281 166 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PCDHGB5Q9Y5G0 923 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PCDHGB3Q9Y5G1 929 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 PCDHA9Q9Y5H5 950 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 EML6Q6ZMW3 1958 aa7.36□□□□□ -1.23
SCN1A-207ENST00000507401 CREBBPQ92793 2442 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 A0A1B0GTL3 188 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 LOC110117498-PIK3R3F6TDL0 507 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 G3V2L1 256 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 J3QRK9 145 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SOCS2O14508 198 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TP53I11O14683 189 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 BET1O15155 118 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CDC40O60508 579 aaKnown RBP eCLIP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 HCN1O60741 890 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 LYPLA1O75608 230 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 PDE9AO76083 593 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CLPSP04118 112 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ATP1B1P05026 303 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TPOP07202 933 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CCL3P10147 92 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 DRD2P14416 443 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 PCSK2P16519 638 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CSNK2A2P19784 350 aaPredicted RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 S1PR1P21453 382 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 EEF1B2P24534 225 aaKnown RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 IDUAP35475 653 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 UGT2B10P36537 528 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ALDH3A2P51648 485 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 IST1P53990 364 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 PKNOX1P55347 436 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 PRKCDQ05655 676 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 EBPQ15125 230 aaKnown RBP7.35□□□□□ -1.23
SCN1A-207ENST00000507401 NTRK2Q16620 822 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 DUSP7Q16829 419 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CYBRD1Q53TN4 286 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SGO1Q5FBB7 561 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 EMC4Q5J8M3 183 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 FAM209AQ5JX71 171 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 HLA-DQA1Q5Y7H0 255 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SLC48A1Q6P1K1 146 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 LETMD1Q6P1Q0 360 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TRILQ7L0X0 811 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 COMMD6Q7Z4G1 85 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ADCK1Q86TW2 530 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CCDC28AQ8IWP9 274 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 GALNT12Q8IXK2 581 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 DDIASQ8IXT1 998 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SVOPLQ8N434 492 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 MFSD4AQ8N468 514 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TMEM251Q8N6I4 163 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ZNF615Q8N8J6 731 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ACBD4Q8NC06 268 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 SETD9Q8NE22 299 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 TOR1AIP2Q8NFQ8 470 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 METTL6Q8TCB7 284 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CA5BP1Q8WTZ4 195 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CAPSLQ8WWF8 208 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 CYGBQ8WWM9 190 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 ASB5Q8WWX0 329 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 PIK3R3Q92569 461 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 FCGR1BQ92637 280 aa7.35□□□□□ -1.23
SCN1A-207ENST00000507401 UCN3Q969E3 161 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms