RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CD226Q15762 336 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 ACKR1Q16570 336 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 SLC25A53Q5H9E4 307 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 ATAD3BQ5T9A4 648 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 GALNT10Q86SR1 603 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 P3H2Q8IVL5 708 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 STEAP2Q8NFT2 490 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 OR5W2Q8NH69 310 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 TMEM234Q8WY98 164 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 PIK3IP1Q96FE7 263 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 OR7D2Q96RA2 312 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 DPY30Q9C005 99 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 NGBQ9NPG2 151 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 DLL4Q9NR61 685 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 POLE3Q9NRF9 147 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 FBXO34Q9NWN3 711 aa12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 C6orf203Q9P0P8 240 aaPredicted RBP12.91□□□□□ -0.34
HMGCS1-203ENST00000507004 SHISA8B8ZZ34 492 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 ETV2O00321 342 aaPredicted RBP12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 ZNF195O14628 629 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 UBL4AP11441 157 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 EFNA1P20827 205 aaPredicted RBP12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 MATN1P21941 496 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 FKBP2P26885 142 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 CCKARP32238 428 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 SOAT1P35610 550 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 SLC6A8P48029 635 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 RPL14P50914 215 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 ANXA11P50995 505 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 HBA1P69905 142 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 LRRC74AQ0VAA2 488 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 FOXF1Q12946 379 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 ZNF239Q16600 458 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 C6orf120Q7Z4R8 191 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 KRTCAP2Q8N6L1 136 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 POC1BQ8TC44 478 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 MIPOL1Q8TD10 442 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 RNF128Q8TEB7 428 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 ST8SIA1Q92185 356 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 TESCQ96BS2 214 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 C18orf12Q96KH6 178 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 SLC35G5Q96KT7 338 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 SDF2Q99470 211 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 KLHL9Q9P2J3 617 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 GIMAP2Q9UG22 337 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 CARD8Q9Y2G2 431 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 CELSR1Q9NYQ6 3014 aa12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 NUP214P35658 2090 aaPredicted RBP12.9□□□□□ -0.34
HMGCS1-203ENST00000507004 RNF103-CHMP3A0A140T963 221 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 PRSS51A0A1B0GVH4 220 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 SERINC4A6NH21 518 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 PRKD3O94806 890 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 PRKCAP17252 672 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 AGTR1P30556 359 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 SLC7A1P30825 629 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 ARRB2P32121 409 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 RAC3P60763 192 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 CHI3L2Q15782 390 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 ZNF141Q15928 474 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 PGS1Q32NB8 556 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 ARHGAP11BQ3KRB8 267 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 C3orf33Q6P1S2 294 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 STAC2Q6ZMT1 411 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 C16orf62Q7Z3J2 963 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 CXorf67Q86X51 503 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 ZNF614Q8N883 585 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 FBXO27Q8NI29 283 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 GPR119Q8TDV5 335 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 ZFP90Q8TF47 636 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 SLC25A43Q8WUT9 341 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 OTUB1Q96FW1 271 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 CCL19Q99731 98 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 LAT2Q9GZY6 243 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 TMEM185BQ9H7F4 350 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 ZNF395Q9H8N7 513 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 KLHL13Q9P2N7 655 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 HAO1Q9UJM8 370 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 PRDM4Q9UKN5 801 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 SLC35A3Q9Y2D2 325 aa12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-203ENST00000507004 A0A1W2PPR1 153 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 ANKRD28O15084 1053 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 NTN1O95631 604 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 DHRS4L1P0CG22 281 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 CREB1P16220 341 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 LBPP18428 481 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 PGCP20142 388 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 UQCRC2P22695 453 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 SFTPDP35247 375 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 SLC1A6P48664 564 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 P2RY6Q15077 328 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 PDCD2Q16342 344 aaPredicted RBP12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 TMEM176BQ3YBM2 270 aaPredicted RBP12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 AP1ARQ63HQ0 302 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 CBLN3Q6UW01 205 aa12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
HMGCS1-203ENST00000507004 FCRLAQ7L513 359 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms