RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CRHP06850 196 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 FCGR2AP12318 317 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 PTGER1P34995 402 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 PTGS2P35354 604 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 DNASE1L1P49184 302 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 GFRA1P56159 465 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 RPS3AP61247 264 aaKnown RBP7.69□□□□□ -1.18
PDGFC-205ENST00000506880 PSME3P61289 254 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 COPZ1P61923 177 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 RPS26P62854 115 aaKnown RBP7.69□□□□□ -1.18
PDGFC-205ENST00000506880 RAC1P63000 192 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 TLE1Q04724 770 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 CHRNEQ04844 493 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 SELENBP1Q13228 472 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 MFSD13AQ14CX5 517 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 GPR68Q15743 365 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 SYPL1Q16563 259 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 PLPPR5Q32ZL2 321 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF311Q5JNZ3 666 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 PDZK1Q5T2W1 519 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 C1QTNF12Q5T7M4 302 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 PRAMEF20Q5VT98 475 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 C6orf89Q6UWU4 347 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 RPTNQ6XPR3 784 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 GRINAQ7Z429 371 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 PTOV1Q86YD1 416 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 SPPL2CQ8IUH8 684 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ARMC8Q8IUR7 673 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ZZZ3Q8IYH5 903 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 C10orf67Q8IYJ2 551 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 MICU2Q8IYU8 434 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 FAM83FQ8NEG4 500 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-205ENST00000506880 OR5M3Q8NGP4 307 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 OR6S1Q8NH40 331 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 OR10A6Q8NH74 314 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 FBXO30Q8TB52 745 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 FAM57AQ8TBR7 257 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 DUSP19Q8WTR2 217 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 RAB8BQ92930 207 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 AURKBQ96GD4 344 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF583Q96ND8 569 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 HS3ST6Q96QI5 342 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 VKORC1Q9BQB6 163 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 MFRPQ9BY79 579 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 TRIM2Q9C040 744 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 LDAHQ9H6V9 325 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 CALHM2Q9HA72 323 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 TIGARQ9NQ88 270 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 GLRX2Q9NS18 164 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ADPRHL2Q9NX46 363 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 TAS2R10Q9NYW0 307 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 MKLN1Q9UL63 735 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF443Q9Y2A4 671 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF175Q9Y473 711 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 NCOA6Q14686 2063 aaPredicted RBP7.69□□□□□ -1.18
PDGFC-205ENST00000506880 LRRK2Q5S007 2527 aa7.69□□□□□ -1.18
PDGFC-205ENST00000506880 NCKAP5O14513 1909 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 UBR5O95071 2799 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 PRAMEF27A3QJZ7 478 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 CD8B2A6NJW9 211 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 J3QKU1 62 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 ZIC3O60481 467 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 FZD7O75084 574 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MFN2O95140 757 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 STAMBPO95630 424 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 LGI1O95970 557 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 LINGO3P0C6S8 592 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 PNMTP11086 282 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 PEX19P40855 299 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 SLC1A3P43003 542 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MAGEA5P43359 124 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 SLC7A2P52569 658 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MTPNP58546 118 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 GPR85P60893 370 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 KCNC4Q03721 635 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 TRAP1Q12931 704 aaKnown RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MAPK11Q15759 364 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 GTDC1Q4AE62 458 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 CCNJQ5T5M9 372 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MRPL2Q5T653 305 aaKnown RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 GTF2IRD2BQ6EKJ0 949 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 WBP2NLQ6ICG8 309 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 C3orf33Q6P1S2 294 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF613Q6PF04 617 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 GFRALQ6UXV0 394 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 APOOLQ6UXV4 268 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 ESPNLQ6ZVH7 1005 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 WDR53Q7Z5U6 358 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 YTHDF3Q7Z739 585 aaKnown RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MARCH3Q86UD3 253 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 GTF2IRD2Q86UP8 949 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 RANBP3LQ86VV4 465 aaPredicted RBP7.68□□□□□ -1.18
PDGFC-205ENST00000506880 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 ANKFN1Q8N957 763 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 OR14L1PQ8NHC6 308 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 GPR119Q8TDV5 335 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 SLC26A7Q8TE54 656 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 DOK4Q8TEW6 326 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 NUDT8Q8WV74 236 aa7.68□□□□□ -1.18
PDGFC-205ENST00000506880 PROX1Q92786 737 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms