RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KCNJ10P78508 379 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CHRNEQ04844 493 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 FADDQ13158 208 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CBFBQ13951 182 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 RGNQ15493 299 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 MAPRE2Q15555 327 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 EMC4Q5J8M3 183 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 PAGE3Q5JUK9 113 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
GYPB-206ENST00000506516 PDZK1Q5T2W1 519 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 C1orf185Q5T7R7 199 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 RAET1LQ5VY80 246 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CGB2Q6NT52 195 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 C3P1Q6ZMU1 363 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 PEX5LQ8IYB4 626 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ULK2Q8IYT8 1036 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 METTL25Q8N6Q8 603 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 TOR1AIP2Q8NFQ8 470 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ZPLD1Q8TCW7 415 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CA5BP1Q8WTZ4 195 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ASB5Q8WWX0 329 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 WDYHV1Q96HA8 205 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 SH3YL1Q96HL8 342 aaPredicted RBP6.58□□□□□ -1.36
GYPB-206ENST00000506516 PSMG3-AS1Q96PY0 264 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 DMRTA2Q96SC8 542 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ELAC2Q9BQ52 826 aaKnown RBP6.58□□□□□ -1.36
GYPB-206ENST00000506516 TTYH2Q9BSA4 534 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 PRDM14Q9GZV8 571 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ZNF350Q9GZX5 532 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 LAT2Q9GZY6 243 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 ADAM19Q9H013 955 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CALHM2Q9HA72 323 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 SLC52A3Q9NQ40 469 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 SLC6A13Q9NSD5 602 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.58□□□□□ -1.36
GYPB-206ENST00000506516 VDAC3Q9Y277 283 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 SLC35A3Q9Y2D2 325 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 CARD8Q9Y2G2 431 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 AP4B1Q9Y6B7 739 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 SHANK1Q9Y566 2161 aa6.58□□□□□ -1.36
GYPB-206ENST00000506516 A0A0G2JPF8 293 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 LOC100653049A0A140TA62 436 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 OR2M5A3KFT3 312 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 PRAMEF27A3QJZ7 478 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 C17orf51A8MQB3 221 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 HNRNPCL2B2RXH8 293 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 HNRNPCL3B7ZW38 293 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 C5orf58C9J3I9 102 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 H0Y3Z8 333 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SLC22A2O15244 555 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 KIAA0513O60268 411 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 HNRNPCL1O60812 293 aaKnown RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 CYP7B1O75881 506 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 KRT34O76011 436 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 EPPINO95925 133 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 NPPAP01160 153 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 C1QCP02747 245 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 DBIP07108 87 aaKnown RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 TFPTP0C1Z6 253 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 HNRNPCL4P0DMR1 293 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 IL7RP16871 459 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ZNF17P17021 662 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 PGCP20142 388 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 POU3F2P20265 443 aaPredicted RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 TCEA1P23193 301 aaKnown RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 LSP1P33241 339 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 TIMP3P35625 211 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SLC6A8P48029 635 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 STARP49675 285 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 MVDP53602 400 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SEC24CP53992 1094 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 GNGT1P63211 74 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ZNF117Q03924 483 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SRYQ05066 204 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 KLF10Q13118 480 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ART3Q13508 389 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 NFYCQ13952 458 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 CYLC2Q14093 348 aaPredicted RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 CD226Q15762 336 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ZSWIM7Q19AV6 140 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 GTDC1Q4AE62 458 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 RUNDC3AQ59EK9 446 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ARSKQ6UWY0 536 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 FRRS1Q6ZNA5 592 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SPATA21Q7Z572 469 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 DHDDSQ86SQ9 333 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 LACC1Q8IV20 430 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 CMIPQ8IY22 773 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 DPP10Q8N608 796 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 TMCO5AQ8N6Q1 288 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ANKFN1Q8N957 763 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 PCYOX1LQ8NBM8 494 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 OR5M1Q8NGP8 315 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 OR5W2Q8NH69 310 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 SLC38A5Q8WUX1 472 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ITLN2Q8WWU7 325 aaPredicted RBP6.57□□□□□ -1.36
GYPB-206ENST00000506516 TMEM234Q8WY98 164 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 ZG16BQ96DA0 208 aa6.57□□□□□ -1.36
GYPB-206ENST00000506516 AURKBQ96GD4 344 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms