RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.87□□□□□ -0.35
CDC42SE2-209ENST00000506419 RAP2CQ9Y3L5 183 aa12.87□□□□□ -0.35
CDC42SE2-209ENST00000506419 DTNAQ9Y4J8 743 aa12.87□□□□□ -0.35
CDC42SE2-209ENST00000506419 ANKRD28O15084 1053 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 KLF4O43474 513 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 SOX30O94993 753 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 NTN1O95631 604 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 BGNP21810 368 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 SFTPDP35247 375 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 EIF1P41567 113 aaKnown RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 SLC1A6P48664 564 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 RPL14P50914 215 aaKnown RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 P2RX1P51575 399 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 MAD2L1Q13257 205 aaPredicted RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 TMEM176BQ3YBM2 270 aaPredicted RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 STAC2Q6ZMT1 411 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 OR6K3Q8NGY3 331 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 MOAP1Q96BY2 351 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 PIK3IP1Q96FE7 263 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 ZC3HAV1LQ96H79 300 aaKnown RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 KLHL15Q96M94 604 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 ZIM3Q96PE6 472 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 MED18Q9BUE0 208 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 SRXN1Q9BYN0 137 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 PAQR5Q9NXK6 330 aaPredicted RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 NOP53Q9NZM5 478 aaKnown RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 MCTS1Q9ULC4 181 aaKnown RBP12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 ACTL7BQ9Y614 415 aa12.86□□□□□ -0.35
CDC42SE2-209ENST00000506419 CENPVL1A0A0U1RR11 272 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 GTPBP1O00178 669 aaKnown RBP12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 ZNF500O60304 480 aaPredicted RBP12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 SYNGR4O95473 234 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 KRT16P08779 473 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 MYZAPP0CAP1 466 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 FCGR2AP12318 317 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 PRKCAP17252 672 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 ADH6P28332 368 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 CTBP2P56545 445 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 PPP2R2AP63151 447 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 PDZK1Q5T2W1 519 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 OR8J2Q8NGG1 315 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 OR5W2Q8NH69 310 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 KCNK9Q9NPC2 374 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 ZNF226Q9NYT6 803 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 HAO1Q9UJM8 370 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 EMC9Q9Y3B6 208 aa12.85□□□□□ -0.35
CDC42SE2-209ENST00000506419 ANK3Q12955 4377 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 FLNAP21333 2647 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 PRSS51A0A1B0GVH4 220 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 PRAMEF27A3QJZ7 478 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 SERINC4A6NH21 518 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ETV2O00321 342 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 RNASET2O00584 256 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 TM9SF1O15321 606 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 EIF4E2O60573 245 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 DNAJA2O60884 412 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 CPSF4O95639 269 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 TUBBP07437 444 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ME2P23368 584 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 SOAT1P35610 550 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 STX3Q13277 289 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 GPR68Q15743 365 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ZNF141Q15928 474 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 MAPK14Q16539 360 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ACKR1Q16570 336 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ARHGAP11BQ3KRB8 267 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 SLC25A53Q5H9E4 307 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 CEP85LQ5SZL2 805 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 PDSS1Q5T2R2 415 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 AP1ARQ63HQ0 302 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 HEPHL1Q6MZM0 1159 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ANKRD46Q86W74 232 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ZNF527Q8NB42 609 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ATP6V1C2Q8NEY4 427 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 OR4A15Q8NGL6 344 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 RFWD2Q8NHY2 731 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ABHD3Q8WU67 409 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ZG16BQ96DA0 208 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 TEX37Q96LM6 180 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 NUF2Q9BZD4 464 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 DPY30Q9C005 99 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 GLRX2Q9NS18 164 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ING1Q9UK53 422 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 MKLN1Q9UL63 735 aa12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 GPC6Q9Y625 555 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE2-209ENST00000506419 ROS1P08922 2347 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 RNF103-CHMP3A0A140T963 221 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 DUXAA6NLW8 204 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 H3BNH8 94 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 ZNF264O43296 627 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 BCAS1O75363 584 aaPredicted RBP12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 UGT2B17O75795 530 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 NUDT14O95848 222 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 OR12D1P0DN82 309 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 ENPP1P22413 925 aa12.83□□□□□ -0.36
CDC42SE2-209ENST00000506419 AGTR1P30556 359 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms