RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 TRIM36Q9NQ86 728 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 DLL4Q9NR61 685 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 SIDT1Q9NXL6 827 aaKnown RBP11.04□□□□□ -0.64
UBE3D-206ENST00000505226 NUBP2Q9Y5Y2 271 aa11.04□□□□□ -0.64
UBE3D-206ENST00000505226 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 IGLON5A6NGN9 336 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 I3L521 148 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 DNAJB6O75190 326 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 OR5F1O95221 314 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 GYPBP06028 91 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 DRD5P21918 477 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 F8A1P23610 371 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 BMP8BP34820 402 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 P2RY2P41231 377 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SELENOPP49908 381 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ANXA11P50995 505 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 VSX2P58304 361 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 HNRNPA1L2Q32P51 320 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM52BQ4KMG9 183 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 FNDC3BQ53EP0 1204 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM255AQ5JRV8 349 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 BMP8AQ7Z5Y6 402 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TOMM5Q8N4H5 51 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 CYB561A3Q8NBI2 242 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TMIEQ8NEW7 156 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 BRIX1Q8TDN6 353 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 GIMAP1Q8WWP7 306 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 C1QTNF2Q9BXJ5 285 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TEX12Q9BXU0 123 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 PITHD1Q9GZP4 211 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 MBNL1Q9NR56 388 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SPHK1Q9NYA1 384 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 MRPL39Q9NYK5 338 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TRPM6Q9BX84 2022 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 CDHR4A6H8M9 788 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 UNC119BA6NIH7 251 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 OR52A4PA6NMU1 304 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TOXO94900 526 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SULT1A3P0DMM9 295 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SULT1A4P0DMN0 295 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 HSD17B2P37059 387 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SOX9P48436 509 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SLC16A1P53985 500 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 POU6F2P78424 691 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM35AQ53FP2 167 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ACSM3Q53FZ2 586 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM65Q6PI78 240 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 GID4Q8IVV7 300 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 GJD3Q8N144 294 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 CEP76Q8TAP6 659 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 FANK1Q8TC84 345 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 GHSRQ92847 366 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 GCDHQ92947 438 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 OR2M2Q96R28 347 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ACTRT3Q9BYD9 372 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 AUNIPQ9H7T9 357 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ADGRL4Q9HBW9 690 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 FBXO34Q9NWN3 711 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 FLVCR2Q9UPI3 526 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 MEIKINA0A087WXM9 373 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 OR5K3A6NET4 321 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF593O00488 134 aaPredicted RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SCAMP1O15126 338 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 LYPD3O95274 346 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ADH1AP07327 375 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 SLC35G4P0C7Q5 338 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 UBL4AP11441 157 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ADH5P11766 374 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 PRKACBP22694 351 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 HOXD10P28358 340 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 PEBP1P30086 187 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 MPIP34949 423 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF81P51508 661 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ARFIP1P53367 373 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 CRYZQ08257 329 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 CEBPEQ15744 281 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 ADAMTSL4Q6UY14 1074 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 NR4A3Q92570 626 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 HGDQ93099 445 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 GSDMCQ9BYG8 508 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 TMEM74BQ9NUR3 256 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 CLDND1Q9NY35 253 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 MRPL15Q9P015 296 aaKnown RBP11.03□□□□□ -0.64
UBE3D-206ENST00000505226 KCNE5Q9UJ90 142 aa11.03□□□□□ -0.64
UBE3D-206ENST00000505226 A0A1W2PRG6 482 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 ITGB8P26012 769 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 EEF1A1P68104 462 aaKnown RBP11.02□□□□□ -0.65
UBE3D-206ENST00000505226 FOXK2Q01167 660 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 MFSD13AQ14CX5 517 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 PXDC1Q5TGL8 231 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 CDC73Q6P1J9 531 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 ADGRD2Q7Z7M1 963 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 OR4N5Q8IXE1 308 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 LNX2Q8N448 690 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 ARL14Q8N4G2 192 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 KCT2Q8NC54 265 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 OR2L5Q8NG80 312 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 OR13C2Q8NGS9 318 aa11.02□□□□□ -0.65
UBE3D-206ENST00000505226 LRRC20Q8TCA0 184 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms