RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 KRTCAP3Q53RY4 240 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 POMZP3Q6PJE2 187 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 ULK2Q8IYT8 1036 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 PNPT1Q8TCS8 783 aaKnown RBP7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 MRGPRX4Q96LA9 322 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 PIF1Q9H611 641 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 GALNT9Q9HCQ5 603 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 SDHAF3Q9NRP4 125 aa7.51□□□□□ -1.21
CDC42SE2-208ENST00000505065 IGKV1D-42A0A075B6H8 117 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ARRDC5A6NEK1 342 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 WIPF3A6NGB9 483 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ANP32DO95626 131 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 FKBP2P26885 142 aaKnown RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CLDN18P56856 261 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF613Q6PF04 617 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CBLN3Q6UW01 205 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 LINC00696Q6ZRV3 163 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 OLIG3Q7RTU3 272 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRICKLE2Q7Z3G6 844 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ARMC8Q8IUR7 673 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ADPRHL1Q8NDY3 354 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 DOHHQ9BU89 302 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 SPATA5L1Q9BVQ7 753 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ARMC1Q9NVT9 282 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 SPRR3Q9UBC9 169 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC7A8Q9UHI5 535 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CDC40O60508 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 WISP2O76076 250 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ACTL6AO96019 429 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CLK1P49759 484 aaKnown RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 H3F3AP84243 136 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 C16orf62Q7Z3J2 963 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 FAM83FQ8NEG4 500 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 NEIL3Q8TAT5 605 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 NPAS1Q99742 590 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 MED17Q9NVC6 651 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 BOKQ9UMX3 212 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 HTR3EA5X5Y0 456 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ADAMDEC1O15204 470 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 PRKAG1P54619 331 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 MMEL1Q495T6 779 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 EMC4Q5J8M3 183 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ADGRG5Q8IZF4 528 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 TMEM156Q8N614 296 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CNOT9Q92600 299 aaKnown RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC38A4Q969I6 547 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 DTNBP1Q96EV8 351 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 OTUB1Q96FW1 271 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF607Q96SK3 696 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CDRT15Q96T59 188 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 TMEM43Q9BTV4 400 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 PTDSS2Q9BVG9 487 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 RNF122Q9H9V4 155 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 MKLN1Q9UL63 735 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 LOC102725191A0A1B0GVB3 256 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 FTCDNL1E5RQL4 147 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 DNPH1O43598 174 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 RASAL1O95294 804 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ARG2P78540 354 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CBX1P83916 185 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 FOXK1P85037 733 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ART3Q13508 389 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CBFBQ13951 182 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CCNIQ14094 377 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 INPP5JQ15735 1006 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 CYBRD1Q53TN4 286 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF770Q6IQ21 691 aaPredicted RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 PEX5LQ8IYB4 626 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 PIK3C3Q8NEB9 887 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 B4GALNT2Q8NHY0 566 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 FAR1Q8WVX9 515 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 XAGE5Q8WWM1 108 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 RELTQ969Z4 430 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC41A3Q96GZ6 507 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 C5orf34Q96MH7 638 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 QRSL1Q9H0R6 528 aaKnown RBP7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 POMPQ9Y244 141 aa7.5□□□□□ -1.21
CDC42SE2-208ENST00000505065 SCDO00767 359 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 AP3D1O14617 1153 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 SLC28A2O43868 658 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 CRYABP02511 175 aaKnown RBP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 P04436 131 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 FESP07332 822 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 UMPSP11172 480 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 ME2P23368 584 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 CPA2P48052 419 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 CTBP2P56545 445 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 EGR4Q05215 589 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 PDK3Q15120 406 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 NNATQ16517 81 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 PLEKHM3Q6ZWE6 761 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 FAM86B1Q8N7N1 296 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 DMRTA2Q96SC8 542 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 SEPHS2Q99611 448 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 KCTD14Q9BQ13 255 aaPredicted RBP7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 ZNF559Q9BR84 538 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 AMBRA1Q9C0C7 1298 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 IL1RAPQ9NPH3 570 aa7.49□□□□□ -1.21
CDC42SE2-208ENST00000505065 LIPGQ9Y5X9 500 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms