RNA–Protein interactions for RNA: ENST00000504855.1

CCNB3P1-201, Transcript of cyclin B3 pseudogene 1, humanhuman

BASIC

Gene CCNB3P1, Length 1,431 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3P1-201ENST00000504855 SKP2Q13309 424 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 NTRK2Q16620 822 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 H3F3CQ6NXT2 135 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 TMEM81Q6P7N7 255 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 OPN5Q6U736 354 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 LYPD8Q6UX82 237 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 GDF7Q7Z4P5 450 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 TSPYL5Q86VY4 417 aaPredicted RBP11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 PARP8Q8N3A8 854 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 MARVELD2Q8N4S9 558 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 DHRSXQ8N5I4 330 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 SLC5A8Q8N695 610 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 IL22RA1Q8N6P7 574 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 ATG16L2Q8NAA4 619 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 OR52J3Q8NH60 311 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 SLC7A13Q8TCU3 470 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 HGDQ93099 445 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 RASL10BQ96S79 203 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 SECISBP2Q96T21 854 aaKnown RBP11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 BARD1Q99728 777 aaKnown RBP11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 DGCR6LQ9BY27 220 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 ANKRD60Q9BZ19 345 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 TBL1XR1Q9BZK7 514 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 LAT2Q9GZY6 243 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 GPN2Q9H9Y4 310 aaPredicted RBP11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 ZNF556Q9HAH1 456 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 SMURF2Q9HAU4 748 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 TMEM27Q9HBJ8 222 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 FLRT3Q9NZU0 649 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 RHCGQ9UBD6 479 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 MGAT4BQ9UQ53 548 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 POFUT2Q9Y2G5 429 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 YARS2Q9Y2Z4 477 aaKnown RBP11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 AK5Q9Y6K8 562 aa11.09□□□□□ -0.63
CCNB3P1-201ENST00000504855 A0A0B4J2E0 115 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 A0A1B0GX12 115 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 CPSF4LA6NMK7 179 aaKnown RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 CDK2AP1O14519 115 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 OR2J2O76002 312 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 SNAP29O95721 258 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 UBTFL6P0CB48 400 aaPredicted RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 GKN3PP0CG01 181 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 PRKACGP22612 351 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 HTR2AP28223 471 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 CAPGP40121 348 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 MLF1P58340 268 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 RPP38P78345 283 aaKnown RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 ADARB1P78563 741 aaKnown RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 IL18R1Q13478 541 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 MED21Q13503 144 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 IL10RAQ13651 578 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 OR1Q1Q15612 314 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 SLC36A3Q495N2 470 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 TTC23Q5W5X9 447 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 PODNL1Q6PEZ8 512 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 CD300LDQ6UXZ3 194 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 RNF113BQ8IZP6 322 aaKnown RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 PHOSPHO1Q8TCT1 267 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 DNAJA4Q8WW22 397 aaPredicted RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 ACOT11Q8WXI4 607 aaPredicted RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 GATA6Q92908 595 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 NXPE2Q96DL1 559 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 SPACA9Q96E40 222 aaPredicted RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 SLC41A3Q96GZ6 507 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 MPP4Q96JB8 637 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 FEVQ99581 238 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 GABARAPL3Q9BY60 117 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 KRCC1Q9NPI7 259 aaPredicted RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 PAPOLBQ9NRJ5 636 aaKnown RBP11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 KRT84Q9NSB2 600 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 HEATR5AQ86XA9 2040 aa11.08□□□□□ -0.64
CCNB3P1-201ENST00000504855 GTPBP1O00178 669 aaKnown RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 TP53I11O14683 189 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 SLC16A6O15403 523 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 NDUFB5O43674 189 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 CHP2O43745 196 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 ZNF354AO60765 605 aaPredicted RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 BCAS1O75363 584 aaPredicted RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 PRG2P13727 222 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 RBM34P42696 430 aaKnown RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 SUMO3P55854 103 aaPredicted RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 COPZ1P61923 177 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 COX10Q12887 443 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 SNTA1Q13424 505 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 LAPTM4AQ15012 233 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 SEC23BQ15437 767 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 CD226Q15762 336 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 ZNF791Q3KP31 576 aaPredicted RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 SOWAHCQ53LP3 525 aaPredicted RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 C6orf52Q5T4I8 152 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 ULK3Q6PHR2 472 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 APOOLQ6UXV4 268 aa11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 RPS19BP1Q86WX3 136 aaKnown RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 CHERPQ8IWX8 916 aaKnown RBP11.07□□□□□ -0.64
CCNB3P1-201ENST00000504855 GPALPP1Q8IXQ4 340 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms