RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RAB43Q86YS6 212 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 ZFPM2Q8WW38 1151 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 OR5B2Q96R09 309 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 POLE4Q9NR33 117 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 TAS2R10Q9NYW0 307 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF879B4DU55 563 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 SLC2A2P11168 524 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 RAE1P78406 368 aaKnown RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 PRAMEF8Q5VWM4 474 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 PRAMEF7Q5VXH5 474 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 OR2I1PQ8NGU4 316 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 TRUB1Q8WWH5 349 aaKnown RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 RXFP3Q9NSD7 469 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 TRPM7Q96QT4 1865 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 H3BMQ9 156 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 RPS5P46782 204 aaKnown RBP13.11□□□□□ -0.31
TCOF1-207ENST00000504761 TP53I3Q53FA7 332 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 EEF1A1P5Q5VTE0 462 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 SAXO2Q658L1 398 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 PLEKHG7Q6ZR37 379 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF627Q7L945 461 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 KIAA1958Q8N8K9 716 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 OR14L1PQ8NHC6 308 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 COG8Q96MW5 612 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 MCCC2Q9HCC0 563 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 SLC35A3Q9Y2D2 325 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 ABCA7Q8IZY2 2146 aa13.11□□□□□ -0.31
TCOF1-207ENST00000504761 NSG1A0A0A6YYJ2 146 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 UPK1AO00322 258 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ANKRD28O15084 1053 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 PRODHO43272 600 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 IFNA6P05013 189 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 CSN2P05814 226 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 PSKH1P11801 424 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 SLC15A1P46059 708 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 PDE7AQ13946 482 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 NKAIN1Q4KMZ8 207 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 FAM180AQ6UWF9 173 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 NKAIN4Q8IVV8 208 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 GGHQ92820 318 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 RPL3LQ92901 407 aaKnown RBP13.1□□□□□ -0.31
TCOF1-207ENST00000504761 OR2A14Q96R47 310 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 CNN2Q99439 309 aaKnown RBP13.1□□□□□ -0.31
TCOF1-207ENST00000504761 C14orf119Q9NWQ9 140 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 A0A1B0GWA3 101 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 SPINT1O43278 529 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF264O43296 627 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 HCRTR1O43613 425 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 CCNKO75909 580 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ZFAND5O76080 213 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 CHRM4P08173 479 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ITGAMP11215 1152 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 OR7A5Q15622 319 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 NKG7Q16617 165 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 OR2G6Q5TZ20 316 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ABHD17BQ5VST6 288 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 TMEM179BQ7Z7N9 219 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF101Q8IZC7 436 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 SAMD12Q8N8I0 201 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 TNFRSF13CQ96RJ3 184 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 SDF2Q99470 211 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 SLC30A2Q9BRI3 323 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 SLC22A7Q9Y694 548 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 TTC28Q96AY4 2481 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 IGHV1OR15-9A0A0B4J2B8 117 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 CSF2P04141 144 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 POU2F2P09086 479 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 GPLD1P80108 840 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 GARNL3Q5VVW2 1013 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 OR2T4Q8NH00 348 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 LYRM4Q9HD34 91 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 ANKRD10Q9NXR5 420 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 PIKFYVEQ9Y2I7 2098 aa13.1□□□□□ -0.31
TCOF1-207ENST00000504761 TCRBV5S2A0A599 114 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PDCD5O14737 125 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 DHFRP00374 187 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PRKXP51817 358 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF829Q3KNS6 432 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF775Q96BV0 537 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 C8orf44Q96CB5 159 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 NXPE2Q96DL1 559 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 FSCN3Q9NQT6 498 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 RBM7Q9Y580 266 aaKnown RBP13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PCM1Q15154 2024 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 A0A1B0GX78 115 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 SERINC4A6NH21 518 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 FLRT2O43155 660 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 HOXC12P31275 282 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 PAMR1Q6UXH9 720 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 GALNTL5Q7Z4T8 443 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 ZNF283Q8N7M2 679 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 NDNFQ8TB73 568 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 WACQ9BTA9 647 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 ATP13A2Q9NQ11 1180 aa13.09□□□□□ -0.31
TCOF1-207ENST00000504761 TDRD6O60522 2096 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms