RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CHCHD2Q9Y6H1 151 aaPredicted RBP9.51□□□□□ -0.89
TPM3-217ENST00000504663 CELSR3Q9NYQ7 3312 aa9.51□□□□□ -0.89
TPM3-217ENST00000504663 A0A087WUU8 490 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 IGLV3-32A0A0A0MS00 114 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 A0A1B0GWA3 101 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 FAAHO00519 579 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 GNGT2O14610 69 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 PIP5K1CO60331 668 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 E2F6O75461 281 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 ITGA10O75578 1167 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 CYP7B1O75881 506 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 GADD45GO95257 159 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 CSTAP01040 98 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 UBTFL6P0CB48 400 aaPredicted RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 UQCRBP14927 111 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 EPHA2P29317 976 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 IL12BP29460 328 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 POLR2IP36954 125 aaKnown RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 DLX5P56178 289 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 EFR3AQ14156 821 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 OR1Q1Q15612 314 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 ZSWIM7Q19AV6 140 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 TBC1D25Q3MII6 688 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 SLC36A3Q495N2 470 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 C6orf52Q5T4I8 152 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 B3GNTL1Q67FW5 361 aaPredicted RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 TMEM81Q6P7N7 255 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 PODNL1Q6PEZ8 512 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 LINC00114Q6XXX2 140 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 PLEKHM3Q6ZWE6 761 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 MARCH3Q86UD3 253 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 RAB43Q86YS6 212 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 TAGAPQ8N103 731 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 SLC15A4Q8N697 577 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 ZNF614Q8N883 585 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 OR10G3Q8NGC4 313 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 GIPC3Q8TF64 312 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 NR4A3Q92570 626 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 SPACA9Q96E40 222 aaPredicted RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 SLC41A3Q96GZ6 507 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 RBM4BQ9BQ04 359 aaKnown RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 ADI1Q9BV57 179 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 RBM4Q9BWF3 364 aaKnown RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 GABARAPL3Q9BY60 117 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 LAT2Q9GZY6 243 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 ANKRD19PQ9H560 264 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 TRIM45Q9H8W5 580 aaPredicted RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 KLHL28Q9NXS3 571 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 SMPD3Q9NY59 655 aaPredicted RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 REV1Q9UBZ9 1251 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 MRTO4Q9UKD2 239 aaKnown RBP9.5□□□□□ -0.89
TPM3-217ENST00000504663 RAB26Q9ULW5 256 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 ICAM5Q9UMF0 924 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 LHX6Q9UPM6 363 aa9.5□□□□□ -0.89
TPM3-217ENST00000504663 IGKV1D-42A0A075B6H8 117 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 TRABD2BA6NFA1 517 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 SCDO00767 359 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 DENRO43583 198 aaKnown RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 ANGPTL1O95841 491 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 GNAO1P09471 354 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 THRBP10828 461 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 UBL4AP11441 157 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 SPINK2P20155 84 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 OMPP47874 163 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 CLK3P49761 638 aaKnown RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 UGT2B15P54855 530 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 NRG3P56975 720 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 TAS2R41P59536 307 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 KCNAB2Q13303 367 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 TOMM34Q15785 309 aaPredicted RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 DCAF10Q5QP82 559 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 ZNF613Q6PF04 617 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 NUP54Q7Z3B4 507 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 ZER1Q7Z7L7 766 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 CCDC71Q8IV32 467 aaPredicted RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 MARVELD2Q8N4S9 558 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 OR4K5Q8NGD3 323 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 SLC22A8Q8TCC7 542 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 MAGEE2Q8TD90 523 aaPredicted RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 BRIX1Q8TDN6 353 aaKnown RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 TMEM255BQ8WV15 326 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 TTC9Q92623 222 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 C3orf49Q96BT1 292 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 FRMD6Q96NE9 622 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 RDH12Q96NR8 316 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 FEVQ99581 238 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 PITX2Q99697 317 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 ZNF559Q9BR84 538 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 DGCR6LQ9BY27 220 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 ANKRD60Q9BZ19 345 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 TOR3AQ9H497 397 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 CDCP1Q9H5V8 836 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 GPN2Q9H9Y4 310 aaPredicted RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 ZBTB20Q9HC78 741 aaPredicted RBP9.49□□□□□ -0.89
TPM3-217ENST00000504663 GALNT9Q9HCQ5 603 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 UBAP1Q9NZ09 502 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 SLC7A7Q9UM01 511 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 CARD8Q9Y2G2 431 aa9.49□□□□□ -0.89
TPM3-217ENST00000504663 NCKAP5O14513 1909 aa9.48□□□□□ -0.89
TPM3-217ENST00000504663 MPDZO75970 2070 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms