RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 NME4O00746 187 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 AQP7O14520 342 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 GCM2O75603 506 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 PABPC4LP0CB38 370 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 PLA2G2AP14555 144 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 CALB2P22676 271 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 RNF144AP50876 292 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC7A2P52569 658 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 EEFSECP57772 596 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 EEF1A1P68104 462 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 RBPJQ06330 500 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 VEZF1Q14119 521 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 ELOAQ14241 798 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 NDUFAF6Q330K2 333 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 LIN52Q52LA3 116 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 EIPR1Q53HC9 387 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 WIPI1Q5MNZ9 446 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 MRPL2Q5T653 305 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 INTS11Q5TA45 600 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 RNF220Q5VTB9 566 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 CCDC80Q76M96 950 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 HMGN2P46Q86SG4 172 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 YRDCQ86U90 279 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 VRK2Q86Y07 508 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 GRAMD2AQ8IUY3 354 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 PGAM4Q8N0Y7 254 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 OR5W2Q8NH69 310 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 FBXO27Q8NI29 283 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC6A15Q9H2J7 730 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 ARMC7Q9H6L4 198 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 SPAG4Q9NPE6 437 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 EXOSC3Q9NQT5 275 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 TAS2R10Q9NYW0 307 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 TMEM181Q9P2C4 612 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 PRDM4Q9UKN5 801 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF443Q9Y2A4 671 aaPredicted RBP10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF835Q9Y2P0 537 aa10.8□□□□□ -0.68
PDLIM5-208ENST00000504489 ELOVL7A1L3X0 281 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 C7orf72A4D263 438 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 CDHR4A6H8M9 788 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 B2RBV5 119 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 FAM47E-STBD1D6RA91 191 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 BCAS1O75363 584 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 SERPINB7O75635 380 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 MFN2O95140 757 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 ACTL6AO96019 429 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 UBTFL6P0CB48 400 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 HK1P19367 917 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 CHMP24386 653 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 PRKAR1BP31321 381 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 PTGS2P35354 604 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 CPOXP36551 454 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 GSK3BP49841 420 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 GFRA1P56159 465 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 B3GALT5-AS1P59052 145 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 HSF1Q00613 529 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 PLAURQ03405 335 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 LIPEQ05469 1076 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 TMEM44Q2T9K0 475 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 PLPPR5Q32ZL2 321 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 NHSL2Q5HYW2 709 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF311Q5JNZ3 666 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF787Q6DD87 383 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 DHRS4L2Q6PKH6 230 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 C16orf89Q6UX73 402 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF836Q6ZNA1 936 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 Q6ZPB1 254 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 FGD2Q7Z6J4 655 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 PATL1Q86TB9 770 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 IFNEQ86WN2 208 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 SPPL2CQ8IUH8 684 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 ZNF440Q8IYI8 595 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 MICU2Q8IYU8 434 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 CLIP4Q8N3C7 705 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 TMCO5AQ8N6Q1 288 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 BHLHE22Q8NFJ8 381 aaPredicted RBP10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 OR2T12Q8NG77 320 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 OR14L1PQ8NHC6 308 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 GPR119Q8TDV5 335 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 CNOT9Q92600 299 aaKnown RBP10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 SLC35B4Q969S0 331 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 ZBTB8AQ96BR9 441 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 SARAFQ96BY9 339 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 ALG2Q9H553 416 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 EXO5Q9H790 373 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 MED17Q9NVC6 651 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 SPRR3Q9UBC9 169 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 USP22Q9UPT9 525 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 CHST2Q9Y4C5 530 aa10.79□□□□□ -0.68
PDLIM5-208ENST00000504489 PRORSD1PA6NEY8 169 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 LINC01387J3KSC0 135 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 M0QX08 132 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 ETV2O00321 342 aaPredicted RBP10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 FAAHO00519 579 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 BCKDKO14874 412 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 GMFGO60234 142 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 CYP7B1O75881 506 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 UBOX5O94941 541 aa10.78□□□□□ -0.68
PDLIM5-208ENST00000504489 NUDT14O95848 222 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms