RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 PLCZ1Q86YW0 608 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 TMCO5AQ8N6Q1 288 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 RNF148Q8N7C7 305 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 WDSUB1Q8N9V3 476 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 TNIP2Q8NFZ5 429 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 NTNG2Q96CW9 530 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 DTNBP1Q96EV8 351 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 SH3YL1Q96HL8 342 aaPredicted RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 GNRHR2Q96P88 292 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 CDRT15Q96T59 188 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 SPATA5L1Q9BVQ7 753 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 C1orf21Q9H246 121 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 ZNF703Q9H7S9 590 aaPredicted RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 TAS2R1Q9NYW7 299 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 GMPR2Q9P2T1 348 aaKnown RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 SEC14L3Q9UDX4 400 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 ZNF232Q9UNY5 417 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 ZNF443Q9Y2A4 671 aaPredicted RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 SLC35A3Q9Y2D2 325 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 C15orf41Q9Y2V0 281 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 IFT52Q9Y366 437 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 HRH3Q9Y5N1 445 aa9.13□□□□□ -0.95
NUP54-203ENST00000504173 GPC6Q9Y625 555 aaPredicted RBP9.13□□□□□ -0.95
NUP54-203ENST00000504173 COL6A5A8TX70 2615 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 IGLV3-32A0A0A0MS00 114 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 PRORSD1PA6NEY8 169 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 CLDN24A6NM45 220 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 GYG2O15488 501 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 ZNF264O43296 627 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 GMNNO75496 209 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 CBR3O75828 277 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 TRAPPC6AO75865 159 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 ATP5HO75947 161 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 THBS1P07996 1170 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 RFPL3SP0C7P2 107 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 PABPC4LP0CB38 370 aaKnown RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 UBTFL6P0CB48 400 aaPredicted RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 NID1P14543 1247 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 TCN1P20061 433 aaPredicted RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 MAGEA5P43359 124 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 RASSF2P50749 326 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 CCR4P51679 360 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 PCBP3P57721 371 aaKnown RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 KCNJ10P78508 379 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 HYAL4Q2M3T9 481 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 LRRC23Q53EV4 343 aaPredicted RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 PRR30Q53SZ7 412 aaPredicted RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 RNFT1Q5M7Z0 435 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 MRPL2Q5T653 305 aaKnown RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 ZNF836Q6ZNA1 936 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 CCDC121Q6ZUS5 278 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 ARMC8Q8IUR7 673 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 CMIPQ8IY22 773 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 ARHGAP24Q8N264 748 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 FAM109AQ8N4B1 249 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 TMEM251Q8N6I4 163 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 FADS6Q8N9I5 356 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 OR2M3Q8NG83 312 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 SPATA3Q8NHX4 192 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 B4GALNT2Q8NHY0 566 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 SLC26A7Q8TE54 656 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 FIG4Q92562 907 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 SNRNP40Q96DI7 357 aaKnown RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 LAT2Q9GZY6 243 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 TSPAN10Q9H1Z9 355 aaPredicted RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 DSN1Q9H410 356 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 ARMC7Q9H6L4 198 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 PTGES2Q9H7Z7 377 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 AGPAT4Q9NRZ5 378 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 OLAHQ9NV23 265 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 MED11Q9P086 117 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 DKKL1Q9UK85 242 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 FBXL2Q9UKC9 423 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 SLC13A4Q9UKG4 626 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 PRPF19Q9UMS4 504 aaKnown RBP9.12□□□□□ -0.95
NUP54-203ENST00000504173 CARD8Q9Y2G2 431 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 NTNG1Q9Y2I2 539 aa9.12□□□□□ -0.95
NUP54-203ENST00000504173 FN1P02751 2386 aaKnown RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 FAM47E-STBD1D6RA91 191 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 NPIPA5E9PKD4 350 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 M0QX08 132 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 CXCR6O00574 342 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 OIP5O43482 229 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 EIF4E2O60573 245 aaKnown RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 NUDT14O95848 222 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 IFNA14P01570 189 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 OPN1SWP03999 348 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 HSD17B1P14061 328 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 GGT1P19440 569 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 MSX1P28360 303 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 HTR1EP28566 365 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 SRD5A2P31213 254 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 PRKAR1BP31321 381 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 PGM1P36871 562 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 ADH7P40394 386 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 P2RX1P51575 399 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 SUMO3P55854 103 aaPredicted RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 DSCR4P56555 118 aaPredicted RBP9.11□□□□□ -0.95
NUP54-203ENST00000504173 ZNF117Q03924 483 aa9.11□□□□□ -0.95
NUP54-203ENST00000504173 GABPB1Q06547 395 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms