RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 IRX1P78414 480 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 TMEM44Q2T9K0 475 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 TMEM52BQ4KMG9 183 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZSCAN25Q6NSZ9 544 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 ACSM5Q6NUN0 579 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 FAM71F2Q6NXP2 309 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 KCNIP4Q6PIL6 250 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 GCNT7Q6ZNI0 430 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 Q6ZPB1 254 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 TMUB2Q71RG4 321 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 IFNEQ86WN2 208 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 TMEM123Q8N131 208 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 STXBP6Q8NFX7 210 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR8J1Q8NGP2 316 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 MIPOL1Q8TD10 442 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 COQ2Q96H96 371 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 C12orf66Q96MD2 445 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 C9orf85Q96MD7 179 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 NPAS2Q99743 824 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 SLC6A7Q99884 636 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 DUSP16Q9BY84 665 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 FN3KRPQ9HA64 309 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 TM9SF3Q9HD45 589 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 AMBNQ9NP70 447 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 MEPEQ9NQ76 525 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 TXLNGQ9NUQ3 528 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 UFSP2Q9NUQ7 469 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 FAM120CQ9NX05 1096 aaKnown RBP4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 HYPKQ9NX55 129 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 ELOVL2Q9NXB9 296 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 NPIPA1Q9UND3 350 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 RNF24Q9Y225 148 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 DCCP43146 1447 aa4.27□□□□□ -1.73
HMGB1P3-201ENST00000502802 XKRY2A2RUG3 117 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR6C65A6NJZ3 312 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 EPM2AB3EWF7 344 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 H0Y8G0 127 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR7A17O14581 309 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 LCMT2O60294 686 aaKnown RBP4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 TSC22D2O75157 780 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 SCGNO76038 276 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 F10P00742 488 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 IGHG3P01860 377 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 DBTP11182 482 aaKnown RBP4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 CDH5P33151 784 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 GRIA1P42261 906 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 GNPDA1P46926 289 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 AP3M2P53677 418 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 GANABQ14697 944 aaKnown RBP4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 SNAI3Q3KNW1 292 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 LGSNQ5TDP6 509 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR8G2PQ6IF36 304 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZYG11AQ6WRX3 759 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 TAS2R42Q7RTR8 314 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 APTXQ7Z2E3 356 aaKnown RBP4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 CDH26Q8IXH8 852 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 WDSUB1Q8N9V3 476 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 OR4D5Q8NGN0 318 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 RNF139Q8WU17 664 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 FBXO32Q969P5 355 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 PELI1Q96FA3 418 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 TRIM51Q9BSJ1 452 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 LRRC61Q9BV99 259 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 MAGT1Q9H0U3 335 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 SMOXQ9NWM0 555 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 NMRK1Q9NWW6 199 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 AIPL1Q9NZN9 384 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 PCSK1NQ9UHG2 260 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 CTNNA3Q9UI47 895 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 CDH9Q9ULB4 789 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 NTNG1Q9Y2I2 539 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 HFM1A2PYH4 1435 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 ADGRL3Q9HAR2 1447 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 KNDC1Q76NI1 1749 aa4.26□□□□□ -1.73
HMGB1P3-201ENST00000502802 FER1L5A0AVI2 2057 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 IGHV3OR16-10A0A075B7F0 116 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 A0A1B0GTH9 108 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 LINC01565O15544 149 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 DPEP1P16444 411 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 USP6P35125 1406 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ETV5P41161 510 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 CSRP3P50461 194 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 OTUD4Q01804 1114 aaKnown RBP4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 CD300CQ08708 224 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 FGL1Q08830 312 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 FCHO2Q0JRZ9 810 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 IL18R1Q13478 541 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ELAVL3Q14576 367 aaKnown RBP4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 MXD4Q14582 209 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ABRAXAS2Q15018 415 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 CYP51A1Q16850 503 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 KCTD21Q4G0X4 260 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF506Q5JVG8 444 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZC2HC1BQ5TFG8 222 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 MEDAGQ5VYS4 303 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 NLRP9Q7RTR0 991 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 LRRC75A-AS1Q8N1F1 130 aa4.25□□□□□ -1.73
HMGB1P3-201ENST00000502802 ABHD12Q8N2K0 398 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms