RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ZNF417Q8TAU3 575 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 ISYNA1Q9NPH2 558 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 PRDM9Q9NQV7 894 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 ACSS1Q9NUB1 689 aaPredicted RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 LHX3Q9UBR4 397 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 SCDO00767 359 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 NDUFB2O95178 105 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 INHBBP09529 407 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 SRCP12931 536 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 TPT1P13693 172 aaKnown RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 KIR2DL3P43628 341 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 EVX1P49640 407 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 NXNL2Q5VZ03 156 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 ZMYND19Q96E35 227 aaPredicted RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 GAL3ST4Q96RP7 486 aa16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 EIF5A2Q9GZV4 153 aaKnown RBP16.16■□□□□ 0.18
HMGXB3-201ENST00000502717 HMGB3O15347 200 aaKnown RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SMAD6O43541 496 aaKnown RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SNRPBP14678 240 aaKnown RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 PYCR3Q53H96 274 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 ZMAT1Q5H9K5 638 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 B3GLCTQ6Y288 498 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 CALHM3Q86XJ0 350 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 BACE2Q9Y5Z0 518 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 ANTXRLA6NF34 631 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 GRXCR1A8MXD5 290 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 PEX12O00623 359 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 PHYHO14832 338 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SGCEO43556 437 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 ADRB3P13945 408 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SYT14P1Q58G82 188 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 CHRDL2Q6WN34 429 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SSX6Q7RTT6 188 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 OR10K1Q8NGX5 313 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 MFSD8Q8NHS3 518 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 GAL3ST3Q96A11 431 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 MED18Q9BUE0 208 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 TRABD2BA6NFA1 517 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 HRGP04196 525 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 KCNJ5P48544 419 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 IRF4Q15306 451 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 RBMS2Q15434 407 aaKnown RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 AFMIDQ63HM1 303 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SLC51BQ86UW2 128 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 RDH10Q8IZV5 341 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 CDCA3Q99618 268 aaPredicted RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 KATNB1Q9BVA0 655 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SRA1Q9HD15 236 aaKnown RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 A4GALTQ9NPC4 353 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 KCNK6Q9Y257 313 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 NPFFR2Q9Y5X5 522 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 MYO10Q9HD67 2058 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SCAMP1O15126 338 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 GPRIN2O60269 458 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 GRPRP30550 384 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 KLHDC8AQ8IYD2 350 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 LINC01465Q8N7H1 131 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 CPNE2Q96FN4 548 aaPredicted RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SFXN2Q96NB2 322 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 DGAT2Q96PD7 388 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 SORBS1Q9BX66 1292 aaKnown RBP16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 STRADBQ9C0K7 418 aa16.15■□□□□ 0.18
HMGXB3-201ENST00000502717 NPC1O15118 1278 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 SFTPBP07988 381 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 HTR1FP30939 366 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 CASRP41180 1078 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 ACTR1BP42025 376 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 ACTR1AP61163 376 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 ABHD4Q8TB40 342 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF480Q8WV37 535 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 EGFP01133 1207 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 ETV5P41161 510 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 AQP2P41181 271 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 CCR6P51684 374 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 TRA2BP62995 288 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 ID2Q02363 134 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 PXKQ7Z7A4 578 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 TMEM150AQ86TG1 271 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 SPNS2Q8IVW8 549 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 ARL14Q8N4G2 192 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 SLC6A5Q9Y345 797 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 TUBAL3A6NHL2 446 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 NAT1P18440 290 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 CR2P20023 1033 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 MAOAP21397 527 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 PBX2P40425 430 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 TGM4P49221 684 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 GPR155Q7Z3F1 870 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 OR4E2Q8NGC2 313 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 SFXN5Q8TD22 340 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 HHIPL1Q96JK4 782 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 WDFY2Q96P53 400 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 PBDC1Q9BVG4 233 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 MCOLN1Q9GZU1 580 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 SLC25A18Q9H1K4 315 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 C20orf85Q9H1P6 137 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 CARS2Q9HA77 564 aaKnown RBP16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 FANCFQ9NPI8 374 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 NME7Q9Y5B8 376 aa16.14■□□□□ 0.17
HMGXB3-201ENST00000502717 SYPP08247 313 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms