RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 BAHD1Q8TBE0 780 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 BPIFA2Q96DR5 249 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 DMRTB1Q96MA1 342 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 DEPDC7Q96QD5 511 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 STACQ99469 402 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 NKX2-4Q9H2Z4 354 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 MEPEQ9NQ76 525 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 DDX28Q9NUL7 540 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 A0A0C4DFX4 3053 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 TRAV27A0A087WT01 109 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 SYNDIG1LA6NDD5 238 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 IDH3BO43837 385 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 BRINP1O60477 761 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 REM1O75628 298 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 RGS9O75916 674 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 GPR75O95800 540 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 SLC2A2P11168 524 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 IL9P15248 144 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 BMP7P18075 431 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 NOS3P29474 1203 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 GABRA3P34903 492 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 EVX1P49640 407 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 FOXK2Q01167 660 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 CSTF1Q05048 431 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 IL18Q14116 193 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 KLHL12Q53G59 568 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 LCN1P1Q5VSP4 162 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 GARNL3Q5VVW2 1013 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 ZC3H14Q6PJT7 736 aaKnown RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 TMEM92Q6UXU6 159 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 RNF44Q7L0R7 432 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 GLCCI1Q86VQ1 547 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 CA13Q8N1Q1 262 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 GRHL3Q8TE85 626 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 PTP4A1Q93096 173 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 IFT27Q9BW83 186 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 TCEAL2Q9H3H9 227 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-204ENST00000501271 FN3KQ9H479 309 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 CAPN10Q9HC96 672 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 SIGLEC7Q9Y286 467 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 CEP290O15078 2479 aa9.13□□□□□ -0.95
CLIP1-204ENST00000501271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 HMX3A6NHT5 357 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SGK494L7N484 410 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 TNFRSF10CO14798 259 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 HCN1O60741 890 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 GALR3O60755 368 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 FMO6PO60774 539 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 ADAM11O75078 769 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CTSBP07858 339 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CELA2BP08218 269 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 MRPL3P09001 348 aaKnown RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SAGP10523 405 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CLUP10909 449 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CHRNB1P11230 501 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 TCEA1P23193 301 aaKnown RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 MYL9P24844 172 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 RFX3P48380 749 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 TPMTP51580 245 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 POU6F2P78424 691 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 BDH1Q02338 343 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 DLX2Q07687 328 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 AMZ1Q400G9 498 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 ZFP69Q49AA0 526 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 TMPRSS11FQ6ZWK6 438 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 ZNF761Q86XN6 746 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CSNK1A1LQ8N752 337 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 FRMD1Q8N878 549 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SLC37A3Q8NCC5 494 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 OR10H4Q8NGA5 316 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 ENKURQ8TC29 256 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SMAP2Q8WU79 429 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 RSC1A1Q92681 617 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 ANKRD9Q96BM1 317 aaPredicted RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CTHRC1Q96CG8 243 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 OR2B2Q9GZK3 357 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 PPIL3Q9H2H8 161 aaKnown RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 RNF121Q9H920 327 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CMC2Q9NRP2 79 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 BABAM2Q9NXR7 383 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CPNE7Q9UBL6 633 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 NUFIP1Q9UHK0 495 aaKnown RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SPACA6W5XKT8 324 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 DAPL1A0PJW8 107 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 C2orf74A8MZ97 194 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 E9PI62 339 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 RGS13O14921 159 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CBX7O95931 251 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 BMP8BP34820 402 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SLC16A1P53985 500 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 RPS7P62081 194 aaKnown RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SRSF5Q13243 272 aaKnown RBP9.12□□□□□ -0.95
CLIP1-204ENST00000501271 TRIQKQ629K1 86 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 Q6ZSR6 202 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 BMP8AQ7Z5Y6 402 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SLC22A18ASQ8N1D0 253 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 OR52R1Q8NGF1 315 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 OR51A7Q8NH64 312 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 SLC7A6Q92536 515 aa9.12□□□□□ -0.95
CLIP1-204ENST00000501271 CNOT9Q92600 299 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms