RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 EFNA2O43921 213 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 ENO1P06733 434 aaKnown RBP12.3□□□□□ -0.44
CCDC58-207ENST00000498466 CSF3P09919 207 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 DHRS4L1P0CG22 281 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 ACP2P11117 423 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 HNF1AP20823 631 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 IGHV1-2P23083 117 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 SLC7A1P30825 629 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 MAP3K8P41279 467 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 RUNX1T1Q06455 604 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 SPOCK1Q08629 439 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 LCP2Q13094 533 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 LIPNQ5VXI9 398 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 P2RY8Q86VZ1 359 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 DEPDC4Q8N2C3 294 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 SLC16A11Q8NCK7 471 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 NUP43Q8NFH3 380 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 OR6Y1Q8NGX8 325 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 CEP70Q8NHQ1 597 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 FAM110BQ8TC76 370 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 HOXB13Q92826 284 aaPredicted RBP12.3□□□□□ -0.44
CCDC58-207ENST00000498466 PAFAH2Q99487 392 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 COQ10BQ9H8M1 238 aa12.3□□□□□ -0.44
CCDC58-207ENST00000498466 WBP11Q9Y2W2 641 aaKnown RBP12.3□□□□□ -0.44
CCDC58-207ENST00000498466 GOLGA8QA0A0J9YX86 632 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 LOC100289279A0A1B0GTE1 492 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 A0A1W2PQD3 144 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 ESYT3A0FGR9 886 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 SERTM1A2A2V5 107 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 SLC35F4A4IF30 521 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 GOLGA8OA6NCC3 632 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 TRIM49D1C9J1S8 452 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 GOLGA8NF8WBI6 632 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 H7C417 338 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 GOLGA8RI6L899 631 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 KIF2AO00139 706 aaPredicted RBP12.29□□□□□ -0.44
CCDC58-207ENST00000498466 PDPK1O15530 556 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 RGS14O43566 566 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 BMP4P12644 408 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 COX5AP20674 150 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 EDNRAP25101 427 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 PTAFRP25105 342 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 LCN1P31025 176 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 SERPINB4P48594 390 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 ZNF83P51522 516 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 EFNA4P52798 201 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 PKNOX1P55347 436 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 RAC3P60763 192 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 ZNF117Q03924 483 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 CHRNEQ04844 493 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 RASGEF1BQ0VAM2 473 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 GGTLC2Q14390 218 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 DUSP5Q16690 384 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 ARL13AQ5H913 290 aaPredicted RBP12.29□□□□□ -0.44
CCDC58-207ENST00000498466 CCNJQ5T5M9 372 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 KLHL17Q6TDP4 642 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 IKBIPQ70UQ0 350 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 ZNF100Q8IYN0 542 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 COX18Q8N8Q8 333 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 OR52N5Q8NH56 324 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 OTUB1Q96FW1 271 aaPredicted RBP12.29□□□□□ -0.44
CCDC58-207ENST00000498466 MS4A4EQ96PG1 132 aa12.29□□□□□ -0.44
CCDC58-207ENST00000498466 IQCGQ9H095 443 aaKnown RBP12.29□□□□□ -0.44
CCDC58-207ENST00000498466 ING1Q9UK53 422 aaPredicted RBP12.29□□□□□ -0.44
CCDC58-207ENST00000498466 GPC6Q9Y625 555 aaPredicted RBP12.29□□□□□ -0.44
CCDC58-207ENST00000498466 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 A0A1W2PNR3 127 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 CIB4A0PJX0 185 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 POC1B-GALNT4F8VUJ3 575 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 WIPF1O43516 503 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 RAD51DO75771 328 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 LY6HO94772 140 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 PGM3O95394 542 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 PGRP06401 933 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 ALOX5P09917 674 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 IMPDH1P20839 514 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 CD40P25942 277 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 RNF144AP50876 292 aaPredicted RBP12.28□□□□□ -0.44
CCDC58-207ENST00000498466 SQLEQ14534 574 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 ANKRD26P1Q6NSI1 321 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 NOXRED1Q6NXP6 359 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 CBLN3Q6UW01 205 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 B3GLCTQ6Y288 498 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 ZNF433Q8N7K0 673 aaPredicted RBP12.28□□□□□ -0.44
CCDC58-207ENST00000498466 ZFP28Q8NHY6 868 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 FAM76AQ8TAV0 307 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 JADE3Q92613 823 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 CIDECQ96AQ7 238 aaPredicted RBP12.28□□□□□ -0.44
CCDC58-207ENST00000498466 GIMAP5Q96F15 307 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 EGLN2Q96KS0 407 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 ZNF300Q96RE9 604 aaPredicted RBP12.28□□□□□ -0.44
CCDC58-207ENST00000498466 EML4Q9HC35 981 aaKnown RBP12.28□□□□□ -0.44
CCDC58-207ENST00000498466 MID1IP1Q9NPA3 183 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 CARD8Q9Y2G2 431 aa12.28□□□□□ -0.44
CCDC58-207ENST00000498466 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.28□□□□□ -0.442e-23■■■■■ 29.6
CCDC58-207ENST00000498466 CADP27708 2225 aa12.27□□□□□ -0.44
CCDC58-207ENST00000498466 CCT8L1PA6NM43 557 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms