RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 SOS1Q07889 1333 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 EVC2Q86UK5 1308 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF644Q9H582 1327 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMEM212A6NML5 194 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PTGES3LE9PB15 166 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 NRP1O14786 923 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RNMTO43148 476 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 TGFB1I1O43294 461 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SH3BP5O60239 455 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CCNT2O60583 730 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 S100BP04271 92 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 THBDP07204 575 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CA3P07451 260 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GUSBP08236 651 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ASNSP08243 561 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SNRPAP09012 282 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 NPSP0C0P6 89 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 UQCRFS1P1P0C7P4 283 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LINC00869P0C866 280 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SULT1A3P0DMM9 295 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SULT1A4P0DMN0 295 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RPS2P15880 293 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 MIPP30301 263 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RPL13AP40429 203 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 NAMPTP43490 491 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SLURP1P55000 103 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CDH12P55289 794 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TAS2R43P59537 309 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TUBA4AP68366 448 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF146Q15072 292 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PCBP2Q15366 365 aaKnown RBP eCLIP1.3□□□□□ -2.22e-6■■■■■ 31.1
XRN1-214ENST00000498077 SLC35G1Q2M3R5 365 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ALG11Q2TAA5 492 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RFX4Q33E94 735 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 KLHL12Q53G59 568 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LY6G5CQ5SRR4 150 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RTL6Q6ICC9 239 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF770Q6IQ21 691 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF474Q6S9Z5 364 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 SMARCD3Q6STE5 483 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 C6orf15Q6UXA7 325 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 MRPL10Q7Z7H8 261 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF410Q86VK4 478 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ARMC8Q8IUR7 673 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF561Q8N587 486 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PARP16Q8N5Y8 322 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 EMC1Q8N766 993 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZFP41Q8N8Y5 198 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 AGBL3Q8NEM8 1001 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GPR156Q8NFN8 814 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 C8orf46Q8TAG6 207 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CALML6Q8TD86 181 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RNF128Q8TEB7 428 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CLEC4DQ8WXI8 215 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 L3HYPDHQ96EM0 354 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RNFT2Q96EX2 444 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RMND5BQ96G75 393 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 SGSM3Q96HU1 749 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GAL3ST4Q96RP7 486 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GPATCH1Q9BRR8 931 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 BRIP1Q9BX63 1249 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RBKSQ9H477 322 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GPATCH2LQ9NWQ4 482 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SPATA2Q9UM82 520 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 UBE2J1Q9Y385 318 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 TMED5Q9Y3A6 229 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 KIF3AQ9Y496 699 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LRP12Q9Y561 859 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RP1P56715 2156 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 MPDZO75970 2070 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CFAP46Q8IYW2 2715 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LOC102723996A0A087X1L8 192 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TRGV5A0A0B4J1U4 118 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TRAV39A0A0B4J263 110 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 NPIPB5A8MRT5 1133 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 FBP2O00757 339 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CYB561D2O14569 222 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GRM6O15303 877 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 TUSC2O75896 110 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF205O95201 554 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ATE1O95260 518 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PLATP00750 562 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ARP10275 920 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF17P17021 662 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ANOS1P23352 680 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 BDNFP23560 247 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CYP3A7P24462 503 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 CYP2F1P24903 491 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PSMB8P28062 276 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GRPRP30550 384 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 LIPAP38571 399 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 PSMD7P51665 324 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 GMFBP60983 142 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 RPS15AP62244 130 aaKnown RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 HAMPP81172 84 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 UBE3AQ05086 875 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ST3GAL3Q11203 375 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 ATXN7L3Q14CW9 347 aaPredicted RBP1.3□□□□□ -2.2
XRN1-214ENST00000498077 ZNF181Q2M3W8 571 aa1.3□□□□□ -2.2
XRN1-214ENST00000498077 SLC25A35Q3KQZ1 300 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms