RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 RIPK4P57078 832 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 AANATQ16613 207 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 TMEM41BQ5BJD5 291 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 EOGTQ5NDL2 527 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 SPATA46Q5T0L3 261 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 ATF7IP2Q5U623 682 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 ASPHD2Q6ICH7 369 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 KCNIP4Q6PIL6 250 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 SYT10Q6XYQ8 523 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 C16orf62Q7Z3J2 963 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 KIAA1328Q86T90 577 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 LCA5Q86VQ0 697 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 PPP1R27Q86WC6 154 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 KRTAP11-1Q8IUC1 163 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 TMEM252Q8N6L7 170 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 STXBP6Q8NFX7 210 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 OR2AP1Q8NGE2 309 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 RAPGEF5Q92565 580 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 CYYR1Q96J86 154 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 C16orf45Q96MC5 204 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-205ENST00000497722 EBF4Q9BQW3 602 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 SPATA16Q9BXB7 569 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 POLR2J2Q9GZM3 115 aaKnown RBP2.31□□□□□ -2.04
PSPC1-205ENST00000497722 POLR2J3Q9H1A7 115 aaKnown RBP2.31□□□□□ -2.04
PSPC1-205ENST00000497722 RHOJQ9H4E5 214 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF385DQ9H6B1 395 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 NANOGQ9H9S0 305 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 HPF1Q9NWY4 346 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 TMEM9Q9P0T7 183 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 RPS6KB2Q9UBS0 482 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 BTNL2Q9UIR0 455 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 ANAPC7Q9UJX3 599 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 MFHAS1Q9Y4C4 1052 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 TTC21BQ7Z4L5 1316 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 PARD3Q8TEW0 1356 aa2.31□□□□□ -2.04
PSPC1-205ENST00000497722 IGKV6D-21A0A0A0MT36 114 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 E7ESA3 106 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 SULT2B1O00204 365 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 CHADO15335 359 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 HCN1O60741 890 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 IDH1O75874 414 aaKnown RBP2.3□□□□□ -2.04
PSPC1-205ENST00000497722 KLF8O95600 359 aaPredicted RBP2.3□□□□□ -2.04
PSPC1-205ENST00000497722 EPB41P11171 864 aaKnown RBP2.3□□□□□ -2.04
PSPC1-205ENST00000497722 MGMTP16455 207 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 FUT3P21217 361 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 PLK1P53350 603 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 LIM2P55344 173 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 CHRNB3Q05901 458 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 CUL1Q13616 776 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 HERPUD1Q15011 391 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 PVRIGQ6DKI7 326 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 FAHD2BQ6P2I3 314 aaPredicted RBP2.3□□□□□ -2.04
PSPC1-205ENST00000497722 CBLN3Q6UW01 205 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 ZSCAN30Q86W11 494 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF573Q86YE8 665 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 ATP6V0D2Q8N8Y2 350 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 DENND6BQ8NEG7 585 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 OR10T2Q8NGX3 314 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 TCTEX1D2Q8WW35 142 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 SLC5A11Q8WWX8 675 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 MRPL38Q96DV4 380 aaKnown RBP2.3□□□□□ -2.04
PSPC1-205ENST00000497722 NUS1Q96E22 293 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 FAHD2AQ96GK7 314 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 LINC00167Q96N53 147 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 TECTBQ96PL2 329 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 CYP2S1Q96SQ9 504 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF184Q99676 751 aaPredicted RBP2.3□□□□□ -2.04
PSPC1-205ENST00000497722 TPPP3Q9BW30 176 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 PLGRKTQ9HBL7 147 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 ANAPC11Q9NYG5 84 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 TAS2R3Q9NYW6 316 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 ISY1Q9ULR0 285 aaKnown RBP2.3□□□□□ -2.04
PSPC1-205ENST00000497722 B9D1Q9UPM9 204 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 METP08581 1390 aa2.3□□□□□ -2.04
PSPC1-205ENST00000497722 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 A0A1B0GUL7 405 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 RGSL1A5PLK6 1076 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 FAM231BA6NCW3 169 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 LATO43561 262 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 NOL3O60936 208 aaKnown RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 F10P00742 488 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 CHRNA1P02708 482 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 SEMG1P04279 462 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 RNH1P13489 461 aaKnown RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 ATP6V1C1P21283 382 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 YWHABP31946 246 aaKnown RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 RDXP35241 583 aaKnown RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 KIR2DS2P43631 304 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 HLCSP50747 726 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 ZNF133P52736 654 aaPredicted RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 HTD2P86397 168 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 TLE4Q04727 773 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 RIPPLY1Q0D2K3 151 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 CCDC173Q0VFZ6 552 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 LAGE3Q14657 143 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 TRIM16LQ309B1 348 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 CCDC137Q6PK04 289 aaKnown RBP2.29□□□□□ -2.04
PSPC1-205ENST00000497722 CXCL17Q6UXB2 119 aa2.29□□□□□ -2.04
PSPC1-205ENST00000497722 TIFABQ6ZNK6 161 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms