RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PAK4O96013 591 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CLUP10909 449 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 RPL3P39023 403 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 PXNP49023 591 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 AP1S2P56377 157 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 EIF4EBP2Q13542 120 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 PRSS53Q2L4Q9 553 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 TMEM201Q5SNT2 666 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 C9orf64Q5T6V5 341 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 ZNF546Q86UE3 836 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 NKAIN4Q8IVV8 208 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 ARL14Q8N4G2 192 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 WFDC5Q8TCV5 224 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 FCAMRQ8WWV6 532 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 OR14A2Q96R54 314 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SYT17Q9BSW7 474 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 ZCCHC2Q9C0B9 1178 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 PRKAG2Q9UGJ0 569 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 GAPDHSO14556 408 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 FADS1O60427 444 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CDC123O75794 336 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CKMP06732 381 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 HOXB3P14651 431 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CD9P21926 228 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 EDNRAP25101 427 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 PDZK1IP1Q13113 114 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 ZNF750Q32MQ0 723 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 GPR33Q49SQ1 333 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 OLFML2AQ68BL7 652 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 H3F3CQ6NXT2 135 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 OVCH2Q7RTZ1 564 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 LRRTM1Q86UE6 522 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 VRK2Q86Y07 508 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 PM20D2Q8IYS1 436 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 PLA2G15Q8NCC3 412 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SMPDL3BQ92485 455 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SLC25A28Q96A46 364 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 WDR77Q9BQA1 342 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CHST8Q9H2A9 424 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 KLHL28Q9NXS3 571 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 P2RX2Q9UBL9 471 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 LHX3Q9UBR4 397 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 GNG8Q9UK08 70 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SH2B3Q9UQQ2 575 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 BACE2Q9Y5Z0 518 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 AUP1Q9Y679 476 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 COL4A5P29400 1685 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 A0A1B0GVT2 93 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 FEZF1A0PJY2 475 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 FAM171A2A8MVW0 826 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 NFKBIEO00221 500 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 KCNAB3O43448 404 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 AKR7A3O95154 331 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 GABRA1P14867 456 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SLC6A12P48065 614 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 MTNR1BP49286 362 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CAPZA1P52907 286 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 B4GALNT1Q00973 533 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SLC9A5Q14940 896 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 PRRT3Q5FWE3 981 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 TMEM220Q6QAJ8 160 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 GPR142Q7Z601 462 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CACUL1Q86Y37 369 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CMTM4Q8IZR5 234 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 CHCHD4Q8N4Q1 142 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 POGLUT1Q8NBL1 392 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 OR4Q3Q8NH05 313 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SMPDL3AQ92484 453 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 ZMYND19Q96E35 227 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 SARGQ9BW04 601 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 FZD3Q9NPG1 666 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 MYEF2Q9P2K5 600 aaKnown RBP9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 B4GALT6Q9UBX8 382 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 LRFN2Q9ULH4 789 aa9.91□□□□□ -0.82
TRAPPC12-223ENST00000497597 A0A0G2JLL6 359 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 PYCARD-AS1I3L0S3 204 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 RECKO95980 971 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 FOSL1P15407 271 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 GSTM3P21266 225 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 KCNJ5P48544 419 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 HOXA1P49639 335 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 NCBP2P52298 156 aaKnown RBP eCLIP9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 ART1P52961 327 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 DLX5P56178 289 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 ZNF155Q12901 538 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 CCL14Q16627 93 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 ZNF792Q3KQV3 632 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 SCGB2B2Q4G0G5 96 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 MANEAQ5SRI9 462 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 FRRS1Q6ZNA5 592 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 PRRT2Q7Z6L0 340 aaPredicted RBP9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 COMTD1Q86VU5 262 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 CCDC116Q8IYX3 515 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 BEST3Q8N1M1 668 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 OR6K6Q8NGW6 343 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 OR1S1Q8NH92 325 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 CASTOR1Q8WTX7 329 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 SFT2D1Q8WV19 159 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 ELP4Q96EB1 424 aa9.9□□□□□ -0.82
TRAPPC12-223ENST00000497597 SCLYQ96I15 445 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms