RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 OR2M3Q8NG83 312 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 B4GALNT2Q8NHY0 566 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 LAT2Q9GZY6 243 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 EGFL7Q9UHF1 273 aa18.24■□□□□ 0.51
CTSD-206ENST00000497544 HEATR5AQ86XA9 2040 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 LRRC3CA6NJW4 275 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 CLDN24A6NM45 220 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 C17orf51A8MQB3 221 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 TFECO14948 347 aaPredicted RBP18.23■□□□□ 0.51
CTSD-206ENST00000497544 GCM2O75603 506 aaPredicted RBP18.23■□□□□ 0.51
CTSD-206ENST00000497544 TRAPPC6AO75865 159 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 DNAJC8O75937 253 aaPredicted RBP18.23■□□□□ 0.51
CTSD-206ENST00000497544 GLSO94925 669 aaPredicted RBP18.23■□□□□ 0.51
CTSD-206ENST00000497544 OPN1SWP03999 348 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 RFPL3SP0C7P2 107 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 UBTFL6P0CB48 400 aaPredicted RBP18.23■□□□□ 0.51
CTSD-206ENST00000497544 ZNF24P17028 368 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 GDF1P27539 372 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 PGM1P36871 562 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 P2RX1P51575 399 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 HYAL4Q2M3T9 481 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 ZNF836Q6ZNA1 936 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 TMEM251Q8N6I4 163 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 TMCO5AQ8N6Q1 288 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 SNRNP40Q96DI7 357 aaKnown RBP18.23■□□□□ 0.51
CTSD-206ENST00000497544 AGPAT4Q9NRZ5 378 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 FBXL2Q9UKC9 423 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 SLC13A4Q9UKG4 626 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 C15orf41Q9Y2V0 281 aa18.23■□□□□ 0.51
CTSD-206ENST00000497544 IGLV3-32A0A0A0MS00 114 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 NUDT14O95848 222 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 GGT1P19440 569 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 ME2P23368 584 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 GRNP28799 593 aaKnown RBP18.22■□□□□ 0.51
CTSD-206ENST00000497544 PRKAR1BP31321 381 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 MSX2P35548 267 aaPredicted RBP18.22■□□□□ 0.51
CTSD-206ENST00000497544 EEF1A1P68104 462 aaKnown RBP18.22■□□□□ 0.51
CTSD-206ENST00000497544 ZNF117Q03924 483 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 DMTNQ08495 405 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 SLC10A1Q14973 349 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 NDUFAF6Q330K2 333 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 LRRC23Q53EV4 343 aaPredicted RBP18.22■□□□□ 0.51
CTSD-206ENST00000497544 EIPR1Q53HC9 387 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 RNF220Q5VTB9 566 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 DHRS4L2Q6PKH6 230 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 FAM109AQ8N4B1 249 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 FADS6Q8N9I5 356 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 SMYD1Q8NB12 490 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 RASSF5Q8WWW0 418 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 CNOT9Q92600 299 aaKnown RBP18.22■□□□□ 0.51
CTSD-206ENST00000497544 FAM162AQ96A26 154 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 PINK1Q9BXM7 581 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 RLIMQ9NVW2 624 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 QPCTLQ9NXS2 382 aa18.22■□□□□ 0.51
CTSD-206ENST00000497544 SVILO95425 2214 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 NPIPA5E9PKD4 350 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 GSC2O15499 205 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 OIP5O43482 229 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 NCK1P16333 377 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 DPP4P27487 766 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 CCR4P51679 360 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 RNFT1Q5M7Z0 435 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 CBLN3Q6UW01 205 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 ZNF440Q8IYI8 595 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 CLIP4Q8N3C7 705 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 TOR1AIP2Q8NFQ8 470 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 FAR1Q8WVX9 515 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 MCUR1Q96AQ8 359 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 TAMM41Q96BW9 452 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 DEFB127Q9H1M4 99 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 KLHL28Q9NXS3 571 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 DKKL1Q9UK85 242 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 NPIPA1Q9UND3 350 aa18.21■□□□□ 0.51
CTSD-206ENST00000497544 NCKAP5O14513 1909 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 CDHR4A6H8M9 788 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 FAM47E-STBD1D6RA91 191 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 TPST1O60507 370 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 SEMA7AO75326 666 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 PDE5AO76074 875 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 SRD5A2P31213 254 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 MAGEA5P43359 124 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 KCNJ5P48544 419 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 SUMO3P55854 103 aaPredicted RBP18.2■□□□□ 0.5
CTSD-206ENST00000497544 DSCR4P56555 118 aaPredicted RBP18.2■□□□□ 0.5
CTSD-206ENST00000497544 NCALDP61601 193 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 BNIP2Q12982 314 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 SKP2Q13309 424 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 DUSP7Q16829 419 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 ZNF550Q7Z398 422 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 GRAMD2AQ8IUY3 354 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 OR5W2Q8NH69 310 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 CLPTM1LQ96KA5 538 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 CADM1Q9BY67 442 aaKnown RBP18.2■□□□□ 0.5
CTSD-206ENST00000497544 PCDHAC1Q9H158 963 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 LDAHQ9H6V9 325 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 ZNF703Q9H7S9 590 aaPredicted RBP18.2■□□□□ 0.5
CTSD-206ENST00000497544 EXOSC3Q9NQT5 275 aaKnown RBP18.2■□□□□ 0.5
CTSD-206ENST00000497544 OLAHQ9NV23 265 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 ASF1BQ9NVP2 202 aa18.2■□□□□ 0.5
CTSD-206ENST00000497544 ADPRHL2Q9NX46 363 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms