RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ARMCX5Q6P1M9 558 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 APOOLQ6UXV4 268 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 Q7L0L9 218 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 NET1Q7Z628 596 aaPredicted RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 EGFL6Q8IUX8 553 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 VSTM4Q8IW00 320 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 OR5D13Q8NGL4 314 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 ITLN1Q8WWA0 313 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 CRYGNQ8WXF5 182 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 STARD8Q92502 1023 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 ART4Q93070 314 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 MYLPFQ96A32 169 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 HAVCR1Q96D42 359 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 DNAJA3Q96EY1 480 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 RPRD1AQ96P16 312 aaPredicted RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 RANBP9Q96S59 729 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 RBM4BQ9BQ04 359 aaKnown RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 SOSTQ9BQB4 213 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 SLC30A2Q9BRI3 323 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 C11orf70Q9BRQ4 267 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 TMEM121Q9BTD3 319 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 CHRDL1Q9BU40 450 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 TRIM15Q9C019 465 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 TDRD3Q9H7E2 651 aaKnown RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 AUNIPQ9H7T9 357 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 C1orf123Q9NWV4 160 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 FAM120CQ9NX05 1096 aaKnown RBP2.91□□□□□ -1.94
CLK1-214ENST00000496205 SLC2A8Q9NY64 477 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 DHRS4-AS1Q9P1J3 65 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 ARMCX1Q9P291 453 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 GHRLQ9UBU3 117 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 SLC9A8Q9Y2E8 581 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 PCNX3Q9H6A9 2034 aa2.91□□□□□ -1.94
CLK1-214ENST00000496205 A0A1B0GTQ1 180 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 ACOD1A6NK06 481 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 SNTNA6NMZ2 147 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 GOLGA8SH3BPF8 625 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 SAP18O00422 153 aaKnown RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 BTN3A3O00478 584 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 TM9SF1O15321 606 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 OR1F1O43749 312 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 ZNF253O75346 499 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 NEBLO76041 1014 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 PAHP00439 452 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 PGK1P00558 417 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 IGHV3-13P01766 116 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 IVLP07476 585 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 GSTT2P0CG29 244 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 GSTT2BP0CG30 244 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 HSMCR30P0CW71 290 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 FOLR2P14207 255 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 BCL3P20749 454 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 PTBP1P26599 531 aaKnown RBP eCLIP2.9□□□□□ -1.95
CLK1-214ENST00000496205 CALML3P27482 149 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 BMI1P35226 326 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 CCT3P49368 545 aaKnown RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 EIF3EP60228 445 aaKnown RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 IL9RQ01113 521 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 PJVKQ0ZLH3 352 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 BST1Q10588 318 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 BNIP1Q12981 228 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 ABRAXAS2Q15018 415 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 CHI3L2Q15782 390 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 SYPL1Q16563 259 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 MAPK6Q16659 721 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 KLHL40Q2TBA0 621 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 MS4A13Q5J8X5 152 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 BEND6Q5SZJ8 279 aaPredicted RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 RAET1LQ5VY80 246 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 ZSCAN25Q6NSZ9 544 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 CLEC2AQ6UVW9 174 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 TMEM184AQ6ZMB5 413 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 STOX1Q6ZVD7 989 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 PDCL2Q8N4E4 241 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 CLDN19Q8N6F1 224 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 CSNK1G2-AS1Q8NCQ2 148 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 NANPQ8TBE9 248 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 M1APQ8TC57 530 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 FNDC8Q8TC99 324 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 FAM222BQ8WU58 562 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 PIGCQ92535 297 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 ISG20Q96AZ6 181 aaKnown RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 TSNARE1Q96NA8 513 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 TGM7Q96PF1 710 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 GAL3ST1Q99999 423 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 C19orf43Q9BQ61 176 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 TUBGCP2Q9BSJ2 902 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 FEM1AQ9BSK4 669 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 MAGT1Q9H0U3 335 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 RHOJQ9H4E5 214 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 DHX33Q9H6R0 707 aaKnown RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 ELOVL3Q9HB03 270 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 UFSP2Q9NUQ7 469 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 SMOXQ9NWM0 555 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 KLHL28Q9NXS3 571 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 PEF1Q9UBV8 284 aaKnown RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 RNF24Q9Y225 148 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 EIF3LQ9Y262 564 aaKnown RBP2.9□□□□□ -1.95
CLK1-214ENST00000496205 GSTK1Q9Y2Q3 226 aa2.9□□□□□ -1.95
CLK1-214ENST00000496205 IFT52Q9Y366 437 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms