RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	C1GALT1C1	Q96EU7	318 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	SH3GL1	Q99961	368 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	SLC6A15	Q9H2J7	730 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	PIF1	Q9H611	641 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	CALML5	Q9NZT1	146 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	SPRR3	Q9UBC9	169 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	B4GALT7	Q9UBV7	327 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	CARD8	Q9Y2G2	431 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	ZNF835	Q9Y2P0	537 aa		10.79	□□□□□ -0.68
APTX-233	ENST00000496030	GPC6	Q9Y625	555 aa	Predicted RBP	10.79	□□□□□ -0.68
APTX-233	ENST00000496030		A0A1B0GTH9	108 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	HCRTR2	O43614	444 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	SUSD5	O60279	629 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	EIF4E2	O60573	245 aa	Known RBP	10.78	□□□□□ -0.68
APTX-233	ENST00000496030	HCN1	O60741	890 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	TRAPPC6A	O75865	159 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	EPPIN	O95925	133 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	DBI	P07108	87 aa	Known RBP	10.78	□□□□□ -0.68
APTX-233	ENST00000496030	ETS2	P15036	469 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	DPP4	P27487	766 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	MSX1	P28360	303 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	SRD5A2	P31213	254 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	PCGF2	P35227	344 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	CPOX	P36551	454 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	DSCR4	P56555	118 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-233	ENST00000496030	PSME3	P61289	254 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	EEF1A1	P68104	462 aa	Known RBP	10.78	□□□□□ -0.68
APTX-233	ENST00000496030	KCNJ10	P78508	379 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	HPCA	P84074	193 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	ART3	Q13508	389 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	SCARB2	Q14108	478 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	GNA13	Q14344	377 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	CYP51A1	Q16850	503 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	EMC4	Q5J8M3	183 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-233	ENST00000496030	ARSK	Q6UWY0	536 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	GFRAL	Q6UXV0	394 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	COMTD1	Q86VU5	262 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	GHDC	Q8N2G8	530 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	CLIP4	Q8N3C7	705 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	C11orf65	Q8NCR3	313 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	OR4K17	Q8NGC6	315 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	OR52P1P	Q8NH57	321 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	B4GALNT2	Q8NHY0	566 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	BBS10	Q8TAM1	723 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	NEIL3	Q8TAT5	605 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	GPR119	Q8TDV5	335 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	ARSG	Q96EG1	525 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-233	ENST00000496030	NSL1	Q96IY1	281 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	NPAS1	Q99742	590 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	ECSIT	Q9BQ95	431 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	LAT2	Q9GZY6	243 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	10.78	□□□□□ -0.68
APTX-233	ENST00000496030	RLIM	Q9NVW2	624 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	ABCD2	Q9UBJ2	740 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	SLC6A5	Q9Y345	797 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	MYO7B	Q6PIF6	2116 aa		10.78	□□□□□ -0.68
APTX-233	ENST00000496030	TRGV5	A0A0B4J1U4	118 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	CDHR4	A6H8M9	788 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	TMEM229A	B2RXF0	380 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	C5orf58	C9J3I9	102 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030		H3BNH8	94 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	GTPBP1	O00178	669 aa	Known RBP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	AQP7	O14520	342 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	ZNF264	O43296	627 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	GMFG	O60234	142 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	TPST1	O60507	370 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	CDC40	O60508	579 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	CSTA	P01040	98 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	THBS1	P07996	1170 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	LINGO3	P0C6S8	592 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	UBL4A	P11441	157 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	NID1	P14543	1247 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	PSMA4	P25789	261 aa	Known RBP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	SLC7A2	P52569	658 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	GFRA1	P56159	465 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	SLC25A3	Q00325	362 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	LIPE	Q05469	1076 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	ELOA	Q14241	798 aa	Known RBP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	TOMM34	Q15785	309 aa	Predicted RBP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	VMAC	Q2NL98	169 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	ZNF836	Q6ZNA1	936 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	CCDC80	Q76M96	950 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	EIF3M	Q7L2H7	374 aa	Known RBP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	TRPM8	Q7Z2W7	1104 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	CMIP	Q8IY22	773 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	PEX5L	Q8IYB4	626 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	ZNF614	Q8N883	585 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	HIPK4	Q8NE63	616 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	POC1B	Q8TC44	478 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	REXO5	Q96IC2	774 aa	Known RBP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	SPATA9	Q9BWV2	254 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	HHATL	Q9HCP6	504 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	MED17	Q9NVC6	651 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	DNAJB12	Q9NXW2	375 aa	Known RBP	10.77	□□□□□ -0.69
APTX-233	ENST00000496030	TAS2R10	Q9NYW0	307 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	TMEM181	Q9P2C4	612 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	TNFRSF10D	Q9UBN6	386 aa		10.77	□□□□□ -0.69
APTX-233	ENST00000496030	ZNF443	Q9Y2A4	671 aa	Predicted RBP	10.77	□□□□□ -0.69

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