RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 SRYQ05066 204 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 ART3Q13508 389 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 MRPL2Q5T653 305 aaKnown RBP17.58■□□□□ 0.4
HDAC4-212ENST00000495497 PRAMEF8Q5VWM4 474 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 PRAMEF7Q5VXH5 474 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 NET1Q7Z628 596 aaPredicted RBP17.58■□□□□ 0.4
HDAC4-212ENST00000495497 LSRQ86X29 649 aaPredicted RBP17.58■□□□□ 0.4
HDAC4-212ENST00000495497 FITM2Q8N6M3 262 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 FAM71CQ8NEG0 241 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 TOR1AIP2Q8NFQ8 470 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 OR5W2Q8NH69 310 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 OIT3Q8WWZ8 545 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 SH3GL1Q99961 368 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 ECSITQ9BQ95 431 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 GPATCH1Q9BRR8 931 aaKnown RBP17.58■□□□□ 0.4
HDAC4-212ENST00000495497 CMTM6Q9NX76 183 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 DNAJB12Q9NXW2 375 aaKnown RBP17.58■□□□□ 0.4
HDAC4-212ENST00000495497 CAMK2AQ9UQM7 478 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 SLC5A6Q9Y289 635 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 CHST2Q9Y4C5 530 aa17.58■□□□□ 0.4
HDAC4-212ENST00000495497 RP1L1Q8IWN7 2480 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 A0A087WZY1 265 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 CCT8L1PA6NM43 557 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 KDM4EB2RXH2 506 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 FAM47E-STBD1D6RA91 191 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 H3BML4 177 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 AGFG2O95081 481 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 ACTL6AO96019 429 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 PABPC4LP0CB38 370 aaKnown RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 RNF224P0DH78 156 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 CHMP24386 653 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 RYKP34925 604 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 LHX2P50458 406 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 EEF1A1P68104 462 aaKnown RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 FOXF1Q12946 379 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 CBFBQ13951 182 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 QPRTQ15274 297 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 TMEM44Q2T9K0 475 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 GLYR1Q49A26 553 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 LIN52Q52LA3 116 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 ZNF311Q5JNZ3 666 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 AAGABQ6PD74 315 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 SERPINA11Q86U17 422 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 CALHM3Q86XJ0 350 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 ULK2Q8IYT8 1036 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 CLIP4Q8N3C7 705 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 METTL25Q8N6Q8 603 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 C11orf65Q8NCR3 313 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 HIPK4Q8NE63 616 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 FBXO27Q8NI29 283 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 BCAS4Q8TDM0 211 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 RNF145Q96MT1 663 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 ZNF583Q96ND8 569 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 PIGQQ9BRB3 760 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 PRDM14Q9GZV8 571 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 TP63Q9H3D4 680 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 ANGPT4Q9Y264 503 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 MEMO1Q9Y316 297 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 GPC6Q9Y625 555 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 POLEQ07864 2286 aa17.57■□□□□ 0.4
HDAC4-212ENST00000495497 UBR5O95071 2799 aaPredicted RBP17.57■□□□□ 0.4
HDAC4-212ENST00000495497 A0A1B0GUH1 482 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 CLEC18AA5D8T8 446 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 H0YC42 278 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 NDUFAB1O14561 156 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 AP3D1O14617 1153 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 GCM2O75603 506 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-212ENST00000495497 OPN1LWP04000 364 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 GKN3PP0CG01 181 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 ESRRAP11474 423 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-212ENST00000495497 ETS2P15036 469 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 IL11P20809 199 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 TPD52P55327 224 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-212ENST00000495497 SUMO3P55854 103 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-212ENST00000495497 RBBP4Q09028 425 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 RTL6Q6ICC9 239 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 C8orf82Q6P1X6 216 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-212ENST00000495497 CLEC18BQ6UXF7 455 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 CMIPQ8IY22 773 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 SLC15A3Q8IY34 581 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 UBQLNLQ8IYU4 475 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 GTPBP8Q8N3Z3 284 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-212ENST00000495497 FAM26EQ8N5C1 309 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 CLEC18CQ8NCF0 446 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 ZBTB8AQ96BR9 441 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 IFT52Q9Y366 437 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 DNAJC13O75165 2243 aa17.56■□□□□ 0.4
HDAC4-212ENST00000495497 TENM4Q6N022 2769 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 MED12Q93074 2177 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 CDHR4A6H8M9 788 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 PRKCAP17252 672 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 POU3F2P20265 443 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-212ENST00000495497 PSMA4P25789 261 aaKnown RBP17.55■□□□□ 0.4
HDAC4-212ENST00000495497 ACVR2AP27037 513 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 SLC7A2P52569 658 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 SUCLG1P53597 346 aaKnown RBP17.55■□□□□ 0.4
HDAC4-212ENST00000495497 CLDN18P56856 261 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 LARS2Q15031 903 aaKnown RBP17.55■□□□□ 0.4
HDAC4-212ENST00000495497 VMACQ2NL98 169 aa17.55■□□□□ 0.4
HDAC4-212ENST00000495497 FAM91A1Q658Y4 838 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms